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对球形红假单胞菌反应中心中P865阳离子自由基自旋密度分布的密度泛函研究。

Density functional studies of the spin density distribution of the P865 cation radical in the reaction center of Rb sphaeroides.

作者信息

Robotham Benjamin, O'Malley Patrick J

机构信息

School of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, UK.

出版信息

Biochemistry. 2008 Dec 16;47(50):13261-6. doi: 10.1021/bi801395s.

Abstract

Density functional calculations are used to calculate the spin density distribution for the P865 dimer cation radical in the Rb sphaeroides reaction center. Comparison between calculated and experimental hyperfine couplings is performed where good agreement is found for the four nitrogen and 121 proton methyl group hyperfine couplings. Overall, the spin density ratio between the two halves is in agreement with experimental determinations, although the calculations suggest that significant differences in this ratio exists for different regions of the bacteriochlorophyll macrocycles. Calculated spin density asymmetry changes brought about by mutational changes in the immediate amino acid environment agree with experimental interpretations.

摘要

密度泛函计算用于计算球形红杆菌反应中心中P865二聚体阳离子自由基的自旋密度分布。对计算得到的超精细耦合和实验得到的超精细耦合进行了比较,发现四个氮原子和121个质子甲基的超精细耦合吻合良好。总体而言,两半部分之间的自旋密度比与实验测定结果一致,尽管计算表明,细菌叶绿素大环不同区域的该比例存在显著差异。由紧邻氨基酸环境中的突变变化引起的计算自旋密度不对称变化与实验解释相符。

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