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使用从头算分子间相互作用势对液态甲烷性质进行的分子动力学模拟。

Molecular dynamics simulations of fluid methane properties using ab initio intermolecular interaction potentials.

作者信息

Chao Shih-Wei, Li Arvin Huang-Te, Chao Sheng D

机构信息

Institute of Applied Mechanics, National Taiwan University, Taipei 106, Taiwan, Republic of China.

出版信息

J Comput Chem. 2009 Sep;30(12):1839-49. doi: 10.1002/jcc.21185.

DOI:10.1002/jcc.21185
PMID:19090563
Abstract

Intermolecular interaction energy data for the methane dimer have been calculated at a spectroscopic accuracy and employed to construct an ab initio potential energy surface (PES) for molecular dynamics (MD) simulations of fluid methane properties. The full potential curves of the methane dimer at 12 symmetric conformations were calculated by the supermolecule counterpoise-corrected second-order Møller-Plesset (MP2) perturbation theory. Single-point coupled cluster with single and double and perturbative triple excitations [CCSD(T)] calculations were also carried out to calibrate the MP2 potentials. We employed Pople's medium size basis sets [up to 6-311++G(3df, 3pd)] and Dunning's correlation consistent basis sets (cc-pVXZ and aug-cc-pVXZ, X = D, T, Q). For each conformer, the intermolecular carbon-carbon separation was sampled in a step 0.1 A for a range of 3-9 A, resulting in a total of 732 configuration points calculated. The MP2 binding curves display significant anisotropy with respect to the relative orientations of the dimer. The potential curves at the complete basis set (CBS) limit were estimated using well-established analytical extrapolation schemes. A 4-site potential model with sites located at the hydrogen atoms was used to fit the ab initio potential data. This model stems from a hydrogen-hydrogen repulsion mechanism to explain the stability of the dimer structure. MD simulations using the ab initio PES show quantitative agreements on both the atom-wise radial distribution functions and the self-diffusion coefficients over a wide range of experimental conditions.

摘要

已以光谱精度计算了甲烷二聚体的分子间相互作用能数据,并将其用于构建用于流体甲烷性质分子动力学(MD)模拟的从头算势能面(PES)。通过超分子平衡校正的二阶Møller-Plesset(MP2)微扰理论计算了甲烷二聚体在12种对称构象下的完整势能曲线。还进行了含单双激发和微扰三重激发的单点耦合簇[CCSD(T)]计算,以校准MP2势能。我们采用了Pople的中等大小基组[最高至6-311++G(3df, 3pd)]和Dunning的相关一致基组(cc-pVXZ和aug-cc-pVXZ,X = D、T、Q)。对于每个构象,在3-9 Å范围内以0.1 Å的步长对分子间碳-碳间距进行采样,总共计算了732个构型点。MP2结合曲线相对于二聚体的相对取向显示出显著的各向异性。使用成熟的解析外推方案估计了完整基组(CBS)极限下的势能曲线。使用位于氢原子处的位点的四点势能模型来拟合从头算势能数据。该模型源于氢-氢排斥机制,以解释二聚体结构的稳定性。使用从头算PES进行的MD模拟在广泛的实验条件下,在原子级径向分布函数和自扩散系数方面都显示出定量一致性。

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