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导致葡萄球菌谷氨酰胺内肽酶蛋白水解活性改变的三种氨基酸的测定

Determination of three amino acids causing alteration of proteolytic activities of staphylococcal glutamyl endopeptidases.

作者信息

Nemoto Takayuki K, Ono Toshio, Shimoyama Yu, Kimura Shigenobu, Ohara-Nemoto Yuko

机构信息

Department of Oral Molecular Biology, Course of Medical and Dental Sciences, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki 852-8588, Japan.

出版信息

Biol Chem. 2009 Mar;390(3):277-85. doi: 10.1515/BC.2009.027.

DOI:10.1515/BC.2009.027
PMID:19090719
Abstract

Staphylococcus aureus, Staphylococcus epidermidis, and Staphylococcus warneri secrete glutamyl endopeptidases, designated GluV8, GluSE, and GluSW, respectively. The order of their protease activities is GluSE < GluSW << GluV8. In the present study, we investigated the mechanism that causes these differences. Expression of chimeric proteins between GluV8 and GluSE revealed that the difference is primarily attributed to amino acid residues 170-195, which define the intrinsic protease activity, and additionally to residues 119-169, which affect the proteolytic sensitivity. Among nine substitutions present in residues 170-195 of the three proteases, the substitutions at positions 185, 188, and 189 were responsible for the changes in their activities, and the combination of W185, V188, and P189, which naturally occurs in GluV8, exerts the highest protease activity. W185 and P189 were indispensable for full activity, but V188 could be replaced by hydrophobic amino acids. These three amino acid residues appear to create a substrate-binding pocket together with the catalytic triad and the N-terminal V1, and therefore define the K(m) values of the proteases. We also describe a method to produce a chimeric form of GluSE and GluV8 that is resistant to proteolysis, and therefore possesses 4-fold higher activity than the wild-type recombinant GluV8.

摘要

金黄色葡萄球菌、表皮葡萄球菌和沃氏葡萄球菌分别分泌谷氨酰胺内肽酶,命名为GluV8、GluSE和GluSW。它们的蛋白酶活性顺序为GluSE < GluSW << GluV8。在本研究中,我们探究了导致这些差异的机制。GluV8和GluSE之间嵌合蛋白的表达表明,差异主要归因于定义内在蛋白酶活性的170 - 195位氨基酸残基,此外还归因于影响蛋白水解敏感性的119 - 169位残基。在这三种蛋白酶170 - 195位的九个取代中,185、188和189位的取代导致了它们活性的变化,天然存在于GluV8中的W185、V188和P189组合具有最高的蛋白酶活性。W185和P189对完全活性是不可或缺的,但V188可以被疏水氨基酸取代。这三个氨基酸残基似乎与催化三联体和N端V1一起形成了一个底物结合口袋,因此决定了蛋白酶的K(m)值。我们还描述了一种生产抗蛋白水解的GluSE和GluV8嵌合形式的方法,因此其活性比野生型重组GluV8高4倍。

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Phenylalanine 664 of dipeptidyl peptidase (DPP) 7 and Phenylalanine 671 of DPP11 mediate preference for P2-position hydrophobic residues of a substrate.二肽基肽酶(DPP)7 的苯丙氨酸 664 和 DPP11 的苯丙氨酸 671 介导对底物 P2 位疏水性残基的偏好。
FEBS Open Bio. 2013 Mar 28;3:177-83. doi: 10.1016/j.fob.2013.03.004. Print 2013.