Qi Dongdong, Zhang Yuexing, Cai Xue, Jiang Jianzhuang, Bai Ming
Department of Chemistry, Shandong University, Jinan 250100, PR China.
J Mol Graph Model. 2009 Feb;27(6):693-700. doi: 10.1016/j.jmgm.2008.10.008. Epub 2008 Nov 5.
Density functional theory (DFT) calculations were carried out to study the inner hydrogen atom transfer in low symmetrical metal-free tetrapyrrole analogues ranging from tetraazaporphyrin H(2)TAP (A(0)B(0)C(0)D(0)) to naphthalocyanine H(2)Nc (A(2)B(2)C(2)D(2)) via phthalocyanine H(2)Pc (A(1)B(1)C(1)D(1)). All the transition paths of sixteen different compounds (A(0)B(0)C(0)D(0)-A(2)B(2)C(2)D(2) and A(0)B(0)C(m)D(n), m <or= n <or= 3) are fully optimized at the B3LYP/6-31G(d) level and vibration analyses have been conducted to verify the optimized structures. It is revealed that the number and position of fused benzene rings onto the TAP skeleton have significant effect on the potential energy barrier of the inner hydrogen atom transfer. Introducing fused benzene rings onto the hydrogen-releasing pyrrole rings can increase the transitivity of inner hydrogen atom and thus lower the transfer barrier of this inner hydrogen atom while fusing benzene rings onto the hydrogen-accepting pyrrole rings will increase the hydrogen transfer barrier to this pyrrole ring. The transient cis-isomer intermediate with hydrogen atoms joined to the two adjacent pyrrole rings with less fused benzene rings is much stable than the others. It is also found that the benzene rings fused directly onto pyrrole rings have more effect on the inner hydrogen atom transfer than the outer benzene rings fused onto the periphery of isoindole rings. The present work, representing the first effort towards systematically understanding the effect of ring enlargement through asymmetrical peripheral fusion of benzene ring(s) onto the TAP skeleton on the inner hydrogen transfer of tetrapyrrole derivatives, will be helpful in clarifying the N-H tautomerization phenomenon and detecting the cis-porphyrin isomer in bio-systems.
进行了密度泛函理论(DFT)计算,以研究低对称无金属四吡咯类似物中氢原子的内转移,这些类似物范围从四氮杂卟啉H(2)TAP(A(0)B(0)C(0)D(0))到萘酞菁H(2)Nc(A(2)B(2)C(2)D(2)),中间经过酞菁H(2)Pc(A(1)B(1)C(1)D(1))。在B3LYP/6 - 31G(d)水平上对十六种不同化合物(A(0)B(0)C(0)D(0)-A(2)B(2)C(2)D(2)以及A(0)B(0)C(m)D(n),m≤n≤3)的所有过渡路径进行了完全优化,并进行了振动分析以验证优化后的结构。结果表明,稠合苯环在TAP骨架上的数量和位置对氢原子内转移的势能垒有显著影响。在释放氢的吡咯环上引入稠合苯环可以增加氢原子内转移的传递性,从而降低该氢原子的转移势垒,而在接受氢的吡咯环上稠合苯环会增加该吡咯环的氢转移势垒。氢原子连接到两个相邻且稠合苯环较少的吡咯环上的瞬态顺式异构体中间体比其他中间体稳定得多。还发现直接稠合在吡咯环上的苯环比稠合在异吲哚环外围的外部苯环对氢原子内转移的影响更大。目前的工作是系统理解通过将苯环不对称外围稠合到TAP骨架上进行扩环对四吡咯衍生物内氢转移的影响的首次尝试,将有助于阐明生物体系中的N - H互变异构现象并检测顺式卟啉异构体。