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原位杂交法评估哺乳动物组织中Wnt和卷曲蛋白基因的表达。

In situ hybridization to evaluate the expression of Wnt and frizzled genes in mammalian tissues.

作者信息

Planutis Kestutis, Planutiene Marina, Holcombe Randall F

机构信息

Division of Hematology/Oncology, University of California-Irvine, Orange, USA.

出版信息

Methods Mol Biol. 2008;468:231-41. doi: 10.1007/978-1-59745-249-6_18.

Abstract

In situ hybridization can be utilized to specifically define the expression of genes and to determine their localization in complex mammalian tissues. The expression of specific members of the Wnt ligand and frizzled receptor families of molecules can be defined using an antisense RNA probe that will specifically hybridize with messenger RNA (mRNA) in the tissue to form a double-stranded product. The double-stranded product can then be detected microscopically by identifying digoxigenin groups that are attached to the probe during its synthesis. Probe sequence selection is critical to ensure specificity among different Wnt or frizzled family members. Controls are needed at every step in the technique to confirm appropriate quality of the tissue sections, quality of the prepared probe, and specificity of the hybridization reactions. If performed properly, in situ hybridization can be utilized to define gene expression and specific localization of RNA in human and other mammalian tissues, and can be utilized in previously fixed and paraffin-embedded tissue samples.

摘要

原位杂交可用于特异性地确定基因的表达,并确定其在复杂哺乳动物组织中的定位。使用反义RNA探针可以确定Wnt配体和卷曲受体家族中特定分子成员的表达,该探针将与组织中的信使RNA(mRNA)特异性杂交以形成双链产物。然后可以通过识别在探针合成过程中附着在探针上的地高辛基团,在显微镜下检测双链产物。探针序列的选择对于确保不同Wnt或卷曲家族成员之间的特异性至关重要。该技术的每一步都需要进行对照,以确认组织切片的适当质量、制备的探针的质量以及杂交反应的特异性。如果操作得当,原位杂交可用于确定人类和其他哺乳动物组织中基因的表达和RNA的特异性定位,并且可用于先前固定和石蜡包埋的组织样本。

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