• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

视黄酸对无脊椎脊索动物文昌鱼(佛罗里达文昌鱼)中ParaHox基因的差异调控。

Differential regulation of ParaHox genes by retinoic acid in the invertebrate chordate amphioxus (Branchiostoma floridae).

作者信息

Osborne Peter W, Benoit Gérard, Laudet Vincent, Schubert Michael, Ferrier David E K

机构信息

Zoology Department, Oxford University, South Parks Road, Oxford, OX1 3PS, UK.

出版信息

Dev Biol. 2009 Mar 1;327(1):252-62. doi: 10.1016/j.ydbio.2008.11.027. Epub 2008 Dec 7.

DOI:10.1016/j.ydbio.2008.11.027
PMID:19103191
Abstract

The ParaHox cluster is the evolutionary sister to the Hox cluster. Like the Hox cluster, the ParaHox cluster displays spatial and temporal regulation of the component genes along the anterior/posterior axis in a manner that correlates with the gene positions within the cluster (a feature called collinearity). The ParaHox cluster is however a simpler system to study because it is composed of only three genes. We provide a detailed analysis of the amphioxus ParaHox cluster and, for the first time in a single species, examine the regulation of the cluster in response to a single developmental signalling molecule, retinoic acid (RA). Embryos treated with either RA or RA antagonist display altered ParaHox gene expression: AmphiGsx expression shifts in the neural tube, and the endodermal boundary between AmphiXlox and AmphiCdx shifts its anterior/posterior position. We identified several putative retinoic acid response elements and in vitro assays suggest some may participate in RA regulation of the ParaHox genes. By comparison to vertebrate ParaHox gene regulation we explore the evolutionary implications. This work highlights how insights into the regulation and evolution of more complex vertebrate arrangements can be obtained through studies of a simpler, unduplicated amphioxus gene cluster.

摘要

ParaHox基因簇是Hox基因簇在进化上的姊妹。与Hox基因簇一样,ParaHox基因簇也显示出其组成基因沿前后轴的时空调控,这种调控方式与基因簇内的基因位置相关(这一特征称为共线性)。然而,ParaHox基因簇是一个更易于研究的系统,因为它仅由三个基因组成。我们对文昌鱼ParaHox基因簇进行了详细分析,并首次在单一物种中研究了该基因簇对单一发育信号分子视黄酸(RA)的反应调控。用RA或RA拮抗剂处理的胚胎显示出ParaHox基因表达的改变:AmphiGsx在神经管中的表达发生变化,AmphiXlox和AmphiCdx之间的内胚层边界在前后位置上发生移动。我们鉴定了几个假定的视黄酸反应元件,体外实验表明其中一些元件可能参与了ParaHox基因的RA调控。通过与脊椎动物ParaHox基因调控进行比较,我们探讨了其进化意义。这项工作突出了如何通过研究一个更简单、未重复的文昌鱼基因簇来深入了解更复杂的脊椎动物基因排列的调控和进化。

相似文献

1
Differential regulation of ParaHox genes by retinoic acid in the invertebrate chordate amphioxus (Branchiostoma floridae).视黄酸对无脊椎脊索动物文昌鱼(佛罗里达文昌鱼)中ParaHox基因的差异调控。
Dev Biol. 2009 Mar 1;327(1):252-62. doi: 10.1016/j.ydbio.2008.11.027. Epub 2008 Dec 7.
2
The ParaHox gene cluster is an evolutionary sister of the Hox gene cluster.副同源盒基因簇是同源盒基因簇在进化上的姐妹。
Nature. 1998 Apr 30;392(6679):920-2. doi: 10.1038/31933.
3
Conserved RARE localization in amphioxus Hox clusters and implications for Hox code evolution in the vertebrate neural crest.文昌鱼Hox基因簇中保守的稀有定位及其对脊椎动物神经嵴中Hox编码进化的影响。
Dev Dyn. 2006 Jun;235(6):1522-31. doi: 10.1002/dvdy.20730.
4
Retinoic acid signaling acts via Hox1 to establish the posterior limit of the pharynx in the chordate amphioxus.视黄酸信号通过Hox1起作用,以确定脊索动物文昌鱼咽部的后界。
Development. 2005 Jan;132(1):61-73. doi: 10.1242/dev.01554. Epub 2004 Dec 2.
5
Retinoic acid signaling targets Hox genes during the amphioxus gastrula stage: insights into early anterior-posterior patterning of the chordate body plan.视黄酸信号在文昌鱼原肠胚阶段靶向 Hox 基因:对脊索动物体轴早期前后模式形成的深入了解。
Dev Biol. 2010 Feb 1;338(1):98-106. doi: 10.1016/j.ydbio.2009.11.016. Epub 2009 Nov 13.
6
Genetic organization and embryonic expression of the ParaHox genes in the sea urchin S. purpuratus: insights into the relationship between clustering and colinearity.紫海胆中ParaHox基因的遗传组织与胚胎表达:对基因成簇与共线性关系的见解
Dev Biol. 2006 Dec 1;300(1):63-73. doi: 10.1016/j.ydbio.2006.07.037. Epub 2006 Aug 4.
7
Conservation and elaboration of Hox gene regulation during evolution of the vertebrate head.脊椎动物头部进化过程中Hox基因调控的保守性与精细演化
Nature. 2000 Dec 14;408(6814):854-7. doi: 10.1038/35048570.
8
Chordate Hox and ParaHox gene clusters differ dramatically in their repetitive element content.脊索动物的 Hox 和 ParaHox 基因簇在重复元件的含量上有显著差异。
Mol Biol Evol. 2010 Feb;27(2):217-20. doi: 10.1093/molbev/msp235. Epub 2009 Oct 5.
9
Colinear and segmental expression of amphioxus Hox genes.文昌鱼Hox基因的共线性和片段性表达。
Dev Biol. 1999 Sep 1;213(1):131-41. doi: 10.1006/dbio.1999.9369.
10
Minimal ProtoHox cluster inferred from bilaterian and cnidarian Hox complements.从两侧对称动物和刺胞动物的Hox基因组合推断出的最小原Hox基因簇。
Nature. 2006 Aug 10;442(7103):684-7. doi: 10.1038/nature04863.

引用本文的文献

1
Single-cell profiling of the amphioxus digestive tract reveals conservation of endocrine cells in chordates.文昌鱼消化道的单细胞分析揭示了脊索动物内分泌细胞的保守性。
Sci Adv. 2024 Dec 20;10(51):eadq0702. doi: 10.1126/sciadv.adq0702.
2
Spatial Colinear but Broken Temporal Expression of Duplicated Genes in Asexually Reproducing Annelids, and .空间共线性但无性繁殖环节动物重复基因的时间表达断裂,和。
Genes (Basel). 2023 Jul 22;14(7):1501. doi: 10.3390/genes14071501.
3
Genome of the ramshorn snail Biomphalaria straminea-an obligate intermediate host of schistosomiasis.
血吸虫病的强制性中间宿主——椎实螺基因组。
Gigascience. 2022 Feb 15;11. doi: 10.1093/gigascience/giac012.
4
Crosstalk between nitric oxide and retinoic acid pathways is essential for amphioxus pharynx development.一氧化氮和维甲酸途径的串扰对于文昌鱼咽部发育是必需的。
Elife. 2021 Aug 25;10:e58295. doi: 10.7554/eLife.58295.
5
A Preliminary Single-Cell RNA-Seq Analysis of Embryonic Cells That Express in the Amphioxus, .文昌鱼中表达的胚胎细胞的初步单细胞RNA测序分析
Front Cell Dev Biol. 2021 Jul 15;9:696875. doi: 10.3389/fcell.2021.696875. eCollection 2021.
6
Non-collinear Hox gene expression in bivalves and the evolution of morphological novelties in mollusks.双壳贝类中不共线的 Hox 基因表达与软体动物形态创新的演化。
Sci Rep. 2021 Feb 11;11(1):3575. doi: 10.1038/s41598-021-82122-6.
7
Mutation of amphioxus Pdx and Cdx demonstrates conserved roles for ParaHox genes in gut, anus and tail patterning.文昌鱼 Pdx 和 Cdx 的突变表明 ParaHox 基因在肠道、肛门和尾部形态发生中具有保守作用。
BMC Biol. 2020 Jun 16;18(1):68. doi: 10.1186/s12915-020-00796-2.
8
Amphioxus SYCP1: a case of retrogene replacement and co-option of regulatory elements adjacent to the ParaHox cluster.文昌鱼SYCP1:一个旁同源盒基因簇相邻调控元件的逆转基因替代与共选择的实例。
Dev Genes Evol. 2018 Jan;228(1):13-30. doi: 10.1007/s00427-017-0600-9. Epub 2018 Jan 2.
9
Transcriptome analysis of different developmental stages of amphioxus reveals dynamic changes of distinct classes of genes during development.文昌鱼不同发育阶段的转录组分析揭示了发育过程中不同类别基因的动态变化。
Sci Rep. 2016 Mar 16;6:23195. doi: 10.1038/srep23195.
10
TCF/Lef regulates the Gsx ParaHox gene in central nervous system development in chordates.TCF/Lef在脊索动物中枢神经系统发育过程中调控Gsx副同源盒基因。
BMC Evol Biol. 2016 Mar 3;16:57. doi: 10.1186/s12862-016-0614-3.