Parikh Amit, Verma Sunil Kumar, Khan Shazia, Prakash Balaji, Nandicoori Vinay Kumar
National Institute of Immunology, New Delhi, India.
J Mol Biol. 2009 Feb 20;386(2):451-64. doi: 10.1016/j.jmb.2008.12.031. Epub 2008 Dec 24.
Identifying direct targets of kinases and determining how their activities are regulated are central to understanding how they generate biological responses. Genetic and biochemical studies have shown that Mycobacterium tuberculosis serine/threonine protein kinases PknA and PknB play a role in modulating cell shape and possibly cell division. In this report, we show that the enzyme N-acetylglucosamine-1-phosphate uridyltransferase (GlmU) of M. tuberculosis is a novel substrate of PknB and is phosphorylated on threonine residues. GlmU carries out two important biochemical activities: a C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate to produce N-acetylglucosamine-1-phosphate, which is converted into UDP-N-acetylglucosamine by the transfer of uridine 5'-monophosphate (from uridine 5'-triphosphate), a reaction catalyzed by the N-terminal domain. We determined the crystal structures of GlmU in apo form and UDP-N-acetylglucosamine-bound form, and analyzed them to identify threonine residues that may be accessible to PknB. The structure shows a two-domain architecture, with an N-terminal domain having an alpha/beta-like fold and with a C-terminal domain that forms a left-handed parallel beta-helix structure. Kinase assays with PknB using the N- and C-terminal domains of GlmU as substrates illustrated that PknB phosphorylates GlmU in the C-terminal domain. Furthermore, mutational studies reveal one of the five threonines present in region 414-439 to be phosphorylated by PknB. Structural and biochemical analyses have shown the significance of a variable C-terminal tail in regulating acetyltransferase activity. Notably, we demonstrate that although PknB-mediated phosphorylation of GlmU does not affect its uridyltransferase activity, it significantly modulates the acetyltransferase activity. These findings imply a role for PknB in regulating peptidoglycan synthesis by modulating the acetyltransferase activity of GlmU.
确定激酶的直接靶点并了解其活性如何被调节,对于理解它们如何产生生物学反应至关重要。遗传和生化研究表明,结核分枝杆菌丝氨酸/苏氨酸蛋白激酶PknA和PknB在调节细胞形状以及可能的细胞分裂中发挥作用。在本报告中,我们表明结核分枝杆菌的N-乙酰葡糖胺-1-磷酸尿苷转移酶(GlmU)是PknB的一种新底物,并在苏氨酸残基上被磷酸化。GlmU具有两种重要的生化活性:一个C末端结构域催化乙酰辅酶A的乙酰基转移到葡糖胺-1-磷酸上,生成N-乙酰葡糖胺-1-磷酸,该产物通过尿苷5'-单磷酸(来自尿苷5'-三磷酸)的转移转化为UDP-N-乙酰葡糖胺,此反应由N末端结构域催化。我们确定了无配体形式和UDP-N-乙酰葡糖胺结合形式的GlmU的晶体结构,并对其进行分析以鉴定可能被PknB作用的苏氨酸残基。该结构显示出一种双结构域架构,N末端结构域具有α/β样折叠,C末端结构域形成左手平行β螺旋结构。使用GlmU的N末端和C末端结构域作为底物与PknB进行的激酶分析表明,PknB使C末端结构域中的GlmU磷酸化。此外,突变研究揭示了414-439区域中存在的五个苏氨酸之一被PknB磷酸化。结构和生化分析表明可变C末端尾巴在调节乙酰转移酶活性方面的重要性。值得注意的是,我们证明虽然PknB介导的GlmU磷酸化不影响其尿苷转移酶活性,但它显著调节乙酰转移酶活性。这些发现暗示PknB在通过调节GlmU的乙酰转移酶活性来调节肽聚糖合成中发挥作用。