Jenkins Joy D, Musayev Faik N, Danso-Danquah Richmond, Abraham Donald J, Safo Martin K
Department of Medicinal Chemistry, School of Pharmacy and Institute for Structural Biology and Drug Discovery, Virginia Commonwealth University, Richmond, VA 23219, USA.
Acta Crystallogr D Biol Crystallogr. 2009 Jan;65(Pt 1):41-8. doi: 10.1107/S0907444908037256. Epub 2008 Dec 18.
Hemoglobin was one of the first protein structures to be determined by X-ray crystallography and served as a basis for the two-state MWC model for the mechanism of allosteric proteins. Since then, there has been an ongoing debate about whether Hb allostery involves the unliganded tense T state and the liganded relaxed R state or whether it involves the T state and an ensemble of liganded relaxed states. In fact, the former model is inconsistent with many functional observations, as well as the recent discoveries of several relaxed-state Hb structures such as RR2, R3 and R2. One school of thought has suggested the R2 state to be the physiologically relevant relaxed end state, with the R state mediating the T-->R2 transition. X-ray studies have been performed on human carbonmonoxy Hb at a resolution of 2.8 A. The ensuing liganded quaternary structure is different from previously reported liganded Hb structures. The distal beta-heme pocket is the largest when compared with other liganded Hb structures, partly owing to rotation of betaHis63(E7) out of the distal pocket, creating a ligand channel to the solvent. The structure also shows unusually smaller alpha- and beta-clefts. Results from this study taken in conjunction with previous findings suggest that multiple liganded Hb states with different quaternary structures may be involved in ligand uptake, stabilization, transport and release.
血红蛋白是最早通过X射线晶体学确定其结构的蛋白质之一,并且为变构蛋白机制的两态MWC模型奠定了基础。从那时起,关于血红蛋白的变构作用是涉及未结合配体的紧张态T态和结合配体的松弛态R态,还是涉及T态和一系列结合配体的松弛态,一直存在争论。事实上,前一种模型与许多功能观察结果不一致,也与最近发现的几种松弛态血红蛋白结构(如RR2、R3和R2)不相符。一种观点认为R2态是生理上相关的松弛终态,R态介导T→R2转变。已对人碳氧血红蛋白进行了分辨率为2.8埃的X射线研究。随后得到的结合配体的四级结构与先前报道的结合配体的血红蛋白结构不同。与其他结合配体的血红蛋白结构相比,远端β-血红素口袋最大,部分原因是βHis63(E7)从远端口袋转出,形成了一个通向溶剂的配体通道。该结构还显示出异常小的α-和β-裂隙。结合先前的研究结果,本研究的结果表明,具有不同四级结构的多种结合配体的血红蛋白状态可能参与配体的摄取、稳定、运输和释放。