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[巴什科尔托斯坦共和国各民族细胞色素P450(CYP1A1)基因多态性分析]

[Analysis of the cytochrome P450 (CYP1A1) gene polymorphism in the ethnic groups of the Republic of Bashkortostan].

作者信息

Kochetova O V, Korytina G F, Akhmadishina L Z, Iskhakov G M, Victorova T V

出版信息

Genetika. 2008 Dec;44(12):1677-83.

Abstract

In three ethnic groups from the Republic of Bashkortostan, Russians (N = 451), Tatars (N= 333), and Bashkirs (N= 171), allele, genotype, and haplotype frequency distribution patterns of the CYP1A1 gene single nucleotide polymorphisms, A2455G and T33801C, were investigated. Substantial interethnic differences in the allele frequency distribution patterns of the CYPIA1 polymorphisms A2455G and T3801C (chi2 = 15.61, d.f. = 2, P = 0.0001; and chi2 = 22.10, d.f. = 2, P = 0.0001, respectively) were observed. Pairwise comparison showed that ethnic groups of Tatars and Russians were similar in the A2455G allele frequencies (chi2 = 1.10, d.f. = 1, P = 0.30). However, in case of the T3801C marker, statistically significant differences were revealed (chi2 = 4.56, d.f. = 1, P = 0.032). At the same time, Bashkir ethnic group was found to be statistically significantly different from Russians and Tatars in the CYP1A1 polymorphic allele frequency distribution patterns (chi2 = 15.74, d.f. = 2, P = 0.0001; and chi2 = 7.47, d.f. = 1, P = 0.024, for A2455G, and chi2 = 6.46, d.f. = 1, P = 0.011; and chi2 = 21.36, d.f. = 1, P = 0.0001, for T3801C). Analysis of the CYP1A1 haplotype diversity showed that in terms of the CYP1A1 haplotype frequency distribution patterns, Bashkir ethnic group was statistically significantly different from both Russians (chi2 = 30.07, d.f. = 3, P = 0.0001) and Tatars (chi2 = 11.28, d.f. = 3, P = 0.013). The differences observed were caused by the high frequency of haplotype CYP1A1*2B, which was represented by a combination of rare alleles of the CYP1A1 polymorphisms A2455G and T3801C in Bashkirs (5.81%). On the other hand, the ethnic groups of Russians and Tatars residing in the Republic of Bashkortostan were characterized by similar frequencies of the CYP1A1 haplotypes (chi2 = 6.322, d.f. = 3, P = 0.127). The data obtained could be used in further investigations of the genetic bases of ecology dependant diseases and in the risk groups in the Republic of Bashkortostan.

摘要

在巴什科尔托斯坦共和国的三个族群中,即俄罗斯人(N = 451)、鞑靼人(N = 333)和巴什基尔人(N = 171),对CYP1A1基因单核苷酸多态性A2455G和T33801C的等位基因、基因型和单倍型频率分布模式进行了研究。观察到CYPIA1多态性A2455G和T3801C的等位基因频率分布模式存在显著的族群间差异(分别为χ2 = 15.61,自由度 = 2,P = 0.0001;以及χ2 = 22.10,自由度 = 2,P = 0.0001)。两两比较显示鞑靼人和俄罗斯人的A2455G等位基因频率相似(χ2 = 1.10,自由度 = 1,P = 0.30)。然而,对于T3801C标记,发现存在统计学显著差异(χ2 = 4.56,自由度 = 1,P = 0.032)。同时,发现巴什基尔族群在CYP1A1多态性等位基因频率分布模式上与俄罗斯人和鞑靼人存在统计学显著差异(对于A2455G,χ2 = 15.74,自由度 = 2,P = 0.0001;χ2 = 7.47,自由度 = 1,P = 0.024;对于T3801C,χ2 = 6.46,自由度 = 1,P = 0.011;χ2 = 21.36,自由度 = 1,P = 0.0001)。对CYP1A1单倍型多样性的分析表明,就CYP1A1单倍型频率分布模式而言,巴什基尔族群与俄罗斯人(χ2 = 30.07,自由度 = 3,P = 0.0001)和鞑靼人(χ2 = 11.28,自由度 = 3,P = 0.013)均存在统计学显著差异。观察到的差异是由单倍型CYP1A1*2B的高频率引起的,该单倍型由巴什基尔人中CYP1A1多态性A2455G和T3801C的罕见等位基因组合而成(5.81%)。另一方面,居住在巴什科尔托斯坦共和国的俄罗斯人和鞑靼人族群的CYP1A1单倍型频率相似(χ2 = 6.322,自由度 = 3,P = 0.127)。所获得的数据可用于巴什科尔托斯坦共和国进一步研究生态依赖性疾病的遗传基础以及风险群体。

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