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与巴西特有珊瑚 Mussismilia braziliensis 相关的细菌多样性。

Bacterial diversity associated with the Brazilian endemic reef coral Mussismilia braziliensis.

机构信息

Universidade Católica de Brasilia, Brazil.

出版信息

J Appl Microbiol. 2009 Apr;106(4):1378-87. doi: 10.1111/j.1365-2672.2008.04106.x. Epub 2009 Jan 30.

Abstract

AIMS

We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach.

METHODS AND RESULTS

The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130-170) and seawater (n = 170) did not reach a plateau.

CONCLUSIONS

The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity.

SIGNIFICANCE AND IMPACT OF THE STUDY

The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis.

摘要

目的

我们采用非培养方法首次对与礁珊瑚 Mussismilia braziliensis 相关的微生物群进行了特征描述。

方法和结果

根据 16S rDNA 文库,主要菌群为变形菌门、蓝细菌门和未分类细菌。健康和患病的 M. braziliensis 黏液中的大多数序列在 GenBank 中没有找到密切匹配的序列(即>97%的 16S rDNA 相似性)。健康珊瑚海水和黏液中的大多数序列形成紧密的聚类(分别为 17 和 15 个聚类)。相比之下,大多数患病珊瑚黏液中的序列没有形成聚类。稀疏曲线表明在较高分类群(约 40 个门)的回收中达到饱和。然而,珊瑚黏液中的物种数量(n=130-170)和海水中的物种数量(n=170)并未达到平台期。

结论

珊瑚微生物群包含几个潜在的新物种和较高分类群。M. braziliensis 的微生物群似乎是特定于物种的。患病珊瑚可能为机会性细菌的定植提供了合适的场所,导致细菌多样性增加。

研究的意义和影响

这是对特有和濒危灭绝珊瑚 M. braziliensis 微生物群多样性的首次研究。

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