Bandyopadhyay Suman, Qui Harry Z, Adler Adam J
Department of Immunology, University of Connecticut Health Center, Farmington, CT 06030-1601, USA.
Immunol Lett. 2009 Feb 21;122(2):214-8. doi: 10.1016/j.imlet.2009.01.001. Epub 2009 Feb 3.
Epigenetic remodeling of genes encoding effector cytokines that permit accessibility to the transcriptional machinery is a central event in the differentiation of naive T cells into effectors that can attack pathogens and tumors. Covalent modifications of histones that cause a loosening of nucleosomal structures occur not only in promoter regions, but also at upstream and downstream enhancer elements that integrate various cellular stimuli to modulate the rate of transcriptional initiation. This knowledge derives mostly from the analysis of in vitro differentiated effector T cells. Here, we compared acetylation of histone H3 (AcH3) at several sites within the Ifng locus in CD8 T cells that underwent effector differentiation in vitro vs. in vivo. While AcH3 was similar at the proximal promoter, it displayed a reciprocal pattern at two well-characterized upstream and downstream sites. These data suggest that certain epigenetic remodeling events may be artifactual consequences of in vitro culturing conditions, and indicate the importance of using in vivo models to study effector cytokine gene remodeling.
编码效应细胞因子的基因发生表观遗传重塑,使转录机制能够接近这些基因,这是幼稚T细胞分化为能够攻击病原体和肿瘤的效应细胞过程中的核心事件。导致核小体结构松弛的组蛋白共价修饰不仅发生在启动子区域,也发生在上游和下游增强子元件处,这些元件整合各种细胞刺激以调节转录起始速率。这些知识大多来自对体外分化的效应T细胞的分析。在这里,我们比较了体外与体内经历效应分化的CD8 T细胞中Ifng基因座内几个位点的组蛋白H3乙酰化(AcH3)情况。虽然近端启动子处的AcH3相似,但在两个特征明确的上游和下游位点呈现出相反的模式。这些数据表明,某些表观遗传重塑事件可能是体外培养条件的人为结果,并表明使用体内模型研究效应细胞因子基因重塑的重要性。
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