• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

DNA桥接与抗桥接:细菌类核相关蛋白在调控横向获得基因表达中的作用

DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes.

作者信息

Dorman Charles J, Kane Kelly A

机构信息

Department of Microbiology, Moyne Institute of Preventive Medicine, Trinity College, Dublin, Ireland.

出版信息

FEMS Microbiol Rev. 2009 May;33(3):587-92. doi: 10.1111/j.1574-6976.2008.00155.x. Epub 2008 Dec 22.

DOI:10.1111/j.1574-6976.2008.00155.x
PMID:19207739
Abstract

Horizontal DNA transfer plays a major role in the evolution of bacteria. It allows them to acquire new traits rapidly and these may confer fitness advantages as the bacteria compete with others in the environment. Historically, the mechanisms of horizontal DNA transfer, chiefly conjugation, transformation and transduction, have received a great deal of attention. Less attention has been focused on the regulatory problems that may accompany the acquisition of new genes by lateral routes. How are these genes integrated into the existing regulatory circuits of the cell? Does a process of 'plug-and-play' operate, or are the new genes silenced pending the evolution of regulatory mechanisms that make their expression not only safe but also beneficial to both the gene and its new host? Recent research shows that bacterial nucleoid-associated proteins such as H-NS, HU and Fis are important contributors to the processes of regulatory integration that accompany horizontal gene transfer. A key emerging theme is the antagonism that exists between the DNA-protein-DNA bridging activity of the H-NS repressor and the DNA-bending and DNA-wrapping activities of regulatory proteins that oppose H-NS.

摘要

水平DNA转移在细菌进化中起着重要作用。它使细菌能够迅速获得新特性,而这些特性在细菌与环境中的其他细菌竞争时可能赋予其适应性优势。从历史上看,水平DNA转移的机制,主要是接合、转化和转导,受到了大量关注。较少的注意力集中在通过侧向途径获得新基因可能伴随的调控问题上。这些基因是如何整合到细胞现有的调控回路中的?“即插即用”过程是否起作用,或者新基因是否会保持沉默,直到调控机制进化到使其表达不仅安全而且对基因及其新宿主都有益?最近的研究表明,诸如H-NS、HU和Fis等细菌类核相关蛋白是伴随水平基因转移的调控整合过程的重要贡献者。一个关键的新出现的主题是H-NS阻遏物的DNA-蛋白质-DNA桥连活性与对抗H-NS的调控蛋白的DNA弯曲和DNA包裹活性之间存在的拮抗作用。

相似文献

1
DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes.DNA桥接与抗桥接:细菌类核相关蛋白在调控横向获得基因表达中的作用
FEMS Microbiol Rev. 2009 May;33(3):587-92. doi: 10.1111/j.1574-6976.2008.00155.x. Epub 2008 Dec 22.
2
Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA.通过一种识别外源DNA的防御系统,H-NS促进细菌横向基因转移从而使异种DNA沉默。
Genes Dev. 2007 Jun 15;21(12):1456-71. doi: 10.1101/gad.1543107.
3
Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella.鼠伤寒沙门氏菌中H-NS蛋白对低GC含量外源DNA的选择性沉默作用
Science. 2006 Jul 14;313(5784):236-8. doi: 10.1126/science.1128794. Epub 2006 Jun 8.
4
The novel Hha/YmoA family of nucleoid-associated proteins: use of structural mimicry to modulate the activity of the H-NS family of proteins.新型类核相关蛋白Hha/YmoA家族:利用结构模拟调节H-NS蛋白家族的活性
Mol Microbiol. 2007 Jan;63(1):7-14. doi: 10.1111/j.1365-2958.2006.05497.x. Epub 2006 Nov 14.
5
H-NS mediates the silencing of laterally acquired genes in bacteria.H-NS介导细菌中横向获得基因的沉默。
PLoS Pathog. 2006 Aug;2(8):e81. doi: 10.1371/journal.ppat.0020081.
6
Nucleoid-associated proteins and bacterial physiology.类核相关蛋白与细菌生理学
Adv Appl Microbiol. 2009;67:47-64. doi: 10.1016/S0065-2164(08)01002-2.
7
Probing bacterial nucleoid structure with optical tweezers.用光镊探究细菌类核结构。
Bioessays. 2007 Mar;29(3):212-6. doi: 10.1002/bies.20542.
8
An H-NS-like stealth protein aids horizontal DNA transmission in bacteria.一种类H-NS的隐蔽蛋白有助于细菌中的水平DNA转移。
Science. 2007 Jan 12;315(5809):251-2. doi: 10.1126/science.1137550.
9
H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria.细菌中类H-NS核仁相关蛋白、可移动遗传元件与水平基因转移
Plasmid. 2014 Sep;75:1-11. doi: 10.1016/j.plasmid.2014.06.004. Epub 2014 Jul 3.
10
The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin.类核相关蛋白在细菌染色质的组织和压缩中的作用。
Mol Microbiol. 2005 May;56(4):858-70. doi: 10.1111/j.1365-2958.2005.04598.x.

引用本文的文献

1
Elementary 3D organization of active and silenced E. coli genome.活跃和沉默的大肠杆菌基因组的基本三维结构
Nature. 2025 Aug 13. doi: 10.1038/s41586-025-09396-y.
2
Quantitative Determination of DNA Bridging Efficiency of Chromatin Proteins.定量测定染色质蛋白的 DNA 桥接效率。
Methods Mol Biol. 2024;2819:443-454. doi: 10.1007/978-1-0716-3930-6_20.
3
Localized modulation of DNA supercoiling, triggered by the Shigella anti-silencer VirB, is sufficient to relieve H-NS-mediated silencing.由痢疾杆菌反沉默因子 VirB 引发的 DNA 超螺旋的局部调节足以缓解 H-NS 介导的沉默。
Nucleic Acids Res. 2023 May 8;51(8):3679-3695. doi: 10.1093/nar/gkad088.
4
HBsu Is Required for the Initiation of DNA Replication in Bacillus subtilis.HBsu 对于枯草芽孢杆菌中 DNA 复制的起始是必需的。
J Bacteriol. 2022 Aug 16;204(8):e0011922. doi: 10.1128/jb.00119-22. Epub 2022 May 12.
5
Facilitated dissociation of nucleoid-associated proteins from DNA in the bacterial confinement.在细菌的局限空间内促进类核相关蛋白与 DNA 的解离。
Biophys J. 2022 Apr 5;121(7):1119-1133. doi: 10.1016/j.bpj.2022.03.002. Epub 2022 Mar 5.
6
Special Issue: Role of Bacterial Chromatin in Environmental Sensing, Adaptation and Evolution.特刊:细菌染色质在环境感知、适应与进化中的作用
Microorganisms. 2021 Nov 22;9(11):2406. doi: 10.3390/microorganisms9112406.
7
A Histone-Like Nucleoid Structuring Protein Regulates Several Virulence Traits in Burkholderia multivorans.组蛋白样核小体结构蛋白调节伯克霍尔德氏菌中的多种毒力特性。
Appl Environ Microbiol. 2021 Jun 25;87(14):e0036921. doi: 10.1128/AEM.00369-21.
8
Redefining the H-NS protein family: a diversity of specialized core and accessory forms exhibit hierarchical transcriptional network integration.重新定义 H-NS 蛋白家族:多样化的专业化核心和辅助形式表现出层次化的转录网络整合。
Nucleic Acids Res. 2020 Oct 9;48(18):10184-10198. doi: 10.1093/nar/gkaa709.
9
Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology.细菌的内源性和外源性类核相关蛋白:存在情况、相互作用及其对可移动遗传元件和宿主生物学的影响
Comput Struct Biotechnol J. 2019 Jun 14;17:746-756. doi: 10.1016/j.csbj.2019.06.010. eCollection 2019.
10
Regulatory Hierarchies Controlling Virulence Gene Expression in and .控制[具体细菌名称1]和[具体细菌名称2]中毒力基因表达的调控层级
Front Microbiol. 2018 Nov 9;9:2686. doi: 10.3389/fmicb.2018.02686. eCollection 2018.