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龟壳的β角蛋白是富含甘氨酸-脯氨酸-酪氨酸的蛋白质,与鳄鱼和鸟类的β角蛋白相似。

Beta-keratins of turtle shell are glycine-proline-tyrosine rich proteins similar to those of crocodilians and birds.

作者信息

Dalla Valle Luisa, Nardi Alessia, Toni Mattia, Emera Deena, Alibardi Lorenzo

机构信息

Dipartimento di Biologia, Università di Padova, Italy.

出版信息

J Anat. 2009 Feb;214(2):284-300. doi: 10.1111/j.1469-7580.2008.01030.x.

Abstract

This study presents, for the first time, sequences of five beta-keratin cDNAs from turtle epidermis obtained by means of 5'- and 3'-rapid amplification of cDNA ends (RACE) analyses. The deduced amino acid sequences correspond to distinct glycine-proline-serine-tyrosine rich proteins containing 122-174 amino acids. In situ hybridization shows that beta-keratin mRNAs are expressed in cells of the differentiating beta-layers of the shell scutes. Southern blotting analysis reveals that turtle beta-keratins belong to a well-conserved multigene family. This result was confirmed by the amplification and sequencing of 13 genomic fragments corresponding to beta-keratin genes. Like snake, crocodile and avian beta-keratin genes, turtle beta-keratins contain an intron that interrupts the 5'-untranslated region. The length of the intron is variable, ranging from 0.35 to 1.00 kb. One of the sequences obtained from genomic amplifications corresponds to one of the five sequences obtained from cDNA cloning; thus, sequences of a total of 17 turtle beta-keratins were determined in the present study. The predicted molecular weight of the 17 different deduced proteins range from 11.9 to 17.0 kDa with a predicted isoelectric point of 6.8-8.4; therefore, they are neutral to basic proteins. A central region rich in proline and with beta-strand conformation shows high conservation with other reptilian and avian beta-keratins, and it is likely involved in their polymerization. Glycine repeat regions, often containing tyrosine, are localized toward the C-terminus. Phylogenetic analysis shows that turtle beta-keratins are more similar to crocodilian and avian beta-keratins than to those of lizards and snakes.

摘要

本研究首次展示了通过5'-和3'-cDNA末端快速扩增(RACE)分析获得的来自龟表皮的五个β-角蛋白cDNA序列。推导的氨基酸序列对应于不同的富含甘氨酸-脯氨酸-丝氨酸-酪氨酸的蛋白质,包含122 - 174个氨基酸。原位杂交表明β-角蛋白mRNA在盾片分化的β层细胞中表达。Southern印迹分析显示龟β-角蛋白属于一个高度保守的多基因家族。对应于β-角蛋白基因的13个基因组片段的扩增和测序证实了这一结果。与蛇、鳄鱼和鸟类的β-角蛋白基因一样,龟β-角蛋白含有一个内含子,该内含子中断了5'-非翻译区。内含子的长度可变,范围从0.35到1.00 kb。从基因组扩增获得的序列之一与从cDNA克隆获得的五个序列之一相对应;因此,本研究共确定了17个龟β-角蛋白的序列。17种不同推导蛋白质的预测分子量范围为11.9至17.0 kDa,预测等电点为6.8 - 8.4;因此,它们是中性至碱性蛋白质。富含脯氨酸且具有β-链构象的中央区域与其他爬行动物和鸟类的β-角蛋白高度保守,并且可能参与它们的聚合。通常含有酪氨酸的甘氨酸重复区域位于C末端。系统发育分析表明,龟β-角蛋白与鳄鱼和鸟类的β-角蛋白比与蜥蜴和蛇的β-角蛋白更相似。

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本文引用的文献

1
An improved general amino acid replacement matrix.
Mol Biol Evol. 2008 Jul;25(7):1307-20. doi: 10.1093/molbev/msn067. Epub 2008 Mar 26.
2
Molecular packing in the feather keratin filament.
J Struct Biol. 2008 Apr;162(1):1-13. doi: 10.1016/j.jsb.2008.01.011. Epub 2008 Feb 2.
3
Hard (Beta-)keratins in the epidermis of reptiles: composition, sequence, and molecular organization.
J Proteome Res. 2007 Sep;6(9):3377-92. doi: 10.1021/pr0702619. Epub 2007 Aug 18.
5
Expression of beta-keratin mRNAs and proline uptake in epidermal cells of growing scales and pad lamellae of gecko lizards.
J Anat. 2007 Jul;211(1):104-16. doi: 10.1111/j.1469-7580.2007.00752.x. Epub 2007 Jun 6.
6
PAML 4: phylogenetic analysis by maximum likelihood.
Mol Biol Evol. 2007 Aug;24(8):1586-91. doi: 10.1093/molbev/msm088. Epub 2007 May 4.
9
Immunological characterization of a newly developed antibody for localization of a beta-keratin in turtle epidermis.
J Exp Zool B Mol Dev Evol. 2007 Mar 15;308(2):200-8. doi: 10.1002/jez.b.21138.
10
Scale keratin in lizard epidermis reveals amino acid regions homologous with avian and mammalian epidermal proteins.
Anat Rec A Discov Mol Cell Evol Biol. 2006 Jul;288(7):734-52. doi: 10.1002/ar.a.20342.

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