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伊朗黄斑角膜营养不良患者中CHST6基因的新型突变

Novel mutations of CHST6 in Iranian patients with macular corneal dystrophy.

作者信息

Birgani Shiva Akbari, Salehi Zivar, Houshmand Masoud, Mohamadi Mohamad Javad, Promehr Leila Azizade, Mozafarzadeh Zahra

机构信息

Department of Biology, University of Guilan Medical Science, Rasht, Iran.

出版信息

Mol Vis. 2009;15:373-7. Epub 2009 Feb 18.

Abstract

PURPOSE

To characterize mutations within the carbohydrate sulfotransferase 6 (CHST6) gene in Iranian subjects from 12 families with macular corneal dystrophy (MCD).

METHODS

Genomic DNA was extracted from peripheral blood of 20 affected patients and 60 healthy volunteers followed by polymerase chain reaction (PCR) and direct sequencing of the CHST6 coding region. The observed nucleotide sequences were then compared with those found by investigators in other populations with MCD and in the controls.

RESULTS

Analysis of CHST6 revealed 11 different mutations. These mutations were comprised of six novel missense mutations (p.F55L, p.P132L, p.S136G, p.C149Y, p.D203Y, and p.H249R), one novel nonsense mutation (p.S48X), one novel frame shift (after P297), and three previously reported missense mutations (p.P31L, p.C165Y, and p.R127C). The majority of the detected MCD mutations are located in the binding sites or the binding pocket, except the p.P31L and p.H249R mutations.

CONCLUSIONS

Nucleotide changes within the coding region of CHST6 are predicted to significantly alter the encoded sulfotransferase within the evolutionary conserved sequences. Our findings show that CHST6 mutations are responsible for the pathogenesis of MCD in Iranian patients. Moreover, the observation that some cases of MCD cannot be explained by mutations in the coding region of CHST6 suggests that MCD may result from possible upstream rearrangements in the CHST6 genomic region.

摘要

目的

对来自12个患有黄斑角膜营养不良(MCD)家庭的伊朗受试者的碳水化合物硫酸转移酶6(CHST6)基因中的突变进行特征分析。

方法

从20名受影响患者和60名健康志愿者的外周血中提取基因组DNA,随后进行聚合酶链反应(PCR)以及CHST6编码区的直接测序。然后将观察到的核苷酸序列与其他患有MCD的人群以及对照组中研究人员发现的序列进行比较。

结果

对CHST6的分析揭示了11种不同的突变。这些突变包括6种新的错义突变(p.F55L、p.P132L、p.S136G、p.C149Y、p.D203Y和p.H249R)、1种新的无义突变(p.S48X)、1种新的移码突变(在P297之后)以及3种先前报道的错义突变(p.P31L、p.C165Y和p.R127C)。除了p.P31L和p.H249R突变外,大多数检测到的MCD突变位于结合位点或结合口袋中。

结论

预计CHST6编码区内的核苷酸变化会显著改变进化保守序列内编码的硫酸转移酶。我们的研究结果表明,CHST6突变是伊朗患者MCD发病机制的原因。此外,一些MCD病例无法用CHST6编码区的突变来解释这一观察结果表明,MCD可能是由CHST6基因组区域中可能的上游重排导致的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a794/2642847/87e018ffe923/mv-v15-373-f1.jpg

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