• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

多位点可逆双生反应。

Multisite reversible geminate reaction.

作者信息

Park Soohyung, Agmon Noam

机构信息

Institute of Chemistry and the Fritz Haber Research Center, The Hebrew University of Jerusalem, Jerusalem 91904, Israel.

出版信息

J Chem Phys. 2009 Feb 21;130(7):074507. doi: 10.1063/1.3074305.

DOI:10.1063/1.3074305
PMID:19239302
Abstract

We provide an analytic solution for diffusion-influenced geminate reaction with multiple (N) reversible binding sites (of which one may be irreversible). The solution obtained in the Laplace domain, for two different initial conditions, is valid for the case when the sites are overlapping spheres with no long-range interactions with the diffusing particle. The possibility to invert into the time domain is determined by a characteristic polynomial. When all its roots are distinct, it is possible to apply the Lagrange interpolation formula and obtain a partial-fraction expansion that can be termwise inverted. At long times the occupancy of all sites, and for all initial conditions, decays as t(-3/2). The behavior at short times depends on the initial condition: when starting from contact, the binding probability rises as t(1/2), but if the particle is initially bound to one of the sites, the occupancy of the others rises as t(3/2). In between these two power laws we observe an intermediate-time kinetics consisting of N decaying exponentials. Those which are slower than a characteristic diffusion time are in the reaction-control regime and fit a discrete-state kinetic approximation with no adjustable parameters, whereas the faster kinetic steps are diffusion controlled. The model solved herein may depict a wide range of physical situations, from multisite proton transfer kinetics to hydrogen-bond dynamics of liquid water.

摘要

我们为具有多个(N)可逆结合位点(其中一个可能是不可逆的)的扩散影响双分子反应提供了一个解析解。在拉普拉斯域中针对两种不同初始条件得到的解,对于位点为重叠球体且与扩散粒子无长程相互作用的情况是有效的。转换到时域的可能性由一个特征多项式决定。当它的所有根都不同时,可以应用拉格朗日插值公式并得到一个可以逐项求逆的部分分式展开。在长时间时,所有位点的占有率以及对于所有初始条件,都按t^(-3/2)衰减。短时间的行为取决于初始条件:从接触开始时,结合概率按t^(1/2)上升,但如果粒子最初与其中一个位点结合,则其他位点的占有率按t^(3/2)上升。在这两个幂律之间,我们观察到一个由N个衰减指数组成的中间时间动力学。那些比特征扩散时间慢的处于反应控制 regime,并且符合无可调参数的离散态动力学近似,而较快的动力学步骤是扩散控制的。本文求解的模型可以描述广泛的物理情况,从多位点质子转移动力学到液态水的氢键动力学。

相似文献

1
Multisite reversible geminate reaction.多位点可逆双生反应。
J Chem Phys. 2009 Feb 21;130(7):074507. doi: 10.1063/1.3074305.
2
Effect of an external electric field on the diffusion-influenced reversible reaction of a neutral particle and a charged particle in three dimensions.外部电场对三维空间中中性粒子与带电粒子扩散影响的可逆反应的作用
J Chem Phys. 2008 Dec 21;129(23):234501. doi: 10.1063/1.3035986.
3
Diffusion-influenced excited-state reversible geminate ABCD reaction in the presence of an external field.在外场存在的情况下,扩散影响的激发态可逆双分子ABCD反应。
Chem Asian J. 2008 Sep 1;3(8-9):1266-76. doi: 10.1002/asia.200800028.
4
Diffusion-influenced reversible geminate ABCD reaction in the presence of an external field.在外场存在下受扩散影响的可逆双生ABCD反应。
J Phys Chem B. 2008 May 15;112(19):6241-9. doi: 10.1021/jp075933x. Epub 2007 Nov 30.
5
Exact solution of the excited-state geminate A*+B <==> C*+D reaction with two different lifetimes and quenching.具有两种不同寿命和猝灭过程的激发态双分子A*+B <==> C*+D反应的精确解
J Chem Phys. 2004 Jul 8;121(2):868-76. doi: 10.1063/1.1755658.
6
Reversible geminate recombination of hydrogen-bonded water molecule pair.氢键结合水分子对的可逆双生重组
J Chem Phys. 2008 Aug 28;129(8):084505. doi: 10.1063/1.2968608.
7
Effect of an external electric field on the diffusion-influenced geminate reversible reaction of a neutral particle and a charged particle in three dimensions. III. Ground-state ABCD reaction.三维中电场对中性粒子和带电粒子扩散影响的成对可逆反应。III.基态 ABCD 反应。
J Chem Phys. 2013 Nov 21;139(19):194107. doi: 10.1063/1.4830401.
8
Theory and simulation of diffusion-controlled Michaelis-Menten kinetics for a static enzyme in solution.溶液中静态酶的扩散控制米氏动力学理论与模拟
J Phys Chem B. 2008 May 15;112(19):5977-87. doi: 10.1021/jp075941d. Epub 2008 Jan 26.
9
Excited-state reversible geminate recombination in two dimensions.二维激发态可逆孪生复合
J Chem Phys. 2009 Oct 21;131(15):154105. doi: 10.1063/1.3242273.
10
Effect of an external electric field on the diffusion-influenced geminate reversible reaction of a neutral particle and a charged particle in three dimensions. IV. Excited-state ABCD reaction.三维空间中中性粒子与带电粒子扩散影响的成对可逆反应在外电场中的影响。IV. 激发态 ABCD 反应。
J Chem Phys. 2014 Feb 14;140(6):064502. doi: 10.1063/1.4864202.

引用本文的文献

1
Multisite reversible association in membranes and solutions: From non-Markovian to Markovian kinetics.多站点膜和溶液中的可逆缔合:从非马尔可夫动力学到马尔可夫动力学。
J Chem Phys. 2020 Mar 14;152(10):104101. doi: 10.1063/1.5144282.
2
Spatial simulations in systems biology: from molecules to cells.系统生物学中的空间模拟:从分子到细胞
Int J Mol Sci. 2012;13(6):7798-7827. doi: 10.3390/ijms13067798. Epub 2012 Jun 21.