García-Consuegra I, Rubio J C, Nogales-Gadea G, Bautista J, Jiménez S, Cabello A, Lucía A, Andreu A L, Arenas J, Martin M A
Centro de Investigación, Hospital Universitario 12 de Octubre, Avda Córdoba s/n, 28041 Madrid, Spain.
J Med Genet. 2009 Mar;46(3):198-202. doi: 10.1136/jmg.2008.059469.
To identify pathogenic mutant alleles of the PYGM gene in "genetic manifesting heterozygous" patients with McArdle disease-that is, those in whom we could only find a sole mutant allele by genomic DNA analysis.
We studied four unrelated patients. PCR-RFLP, gene sequencing, and muscle cDNA analysis were performed to search for mutations in the PYGM gene. The effects of the mutations were evaluated by in silico analysis, and gene expression was assessed by real-time polymerase chain reaction (PCR).
Patient 1 was a compound heterozygous for the p.G205S missense mutation and for a novel "in frame" mutation, p.Q176_M177insVQ, resulting from a retention of six nucleotides from the 3'-end sequence of intron 4. Patient 2 was heterozygous for the common nonsense mutation p.R50X, and for a 1094 bp, c.1969+214_2177+369del mutation, spanning from intron 16 to intron 17 sequences. Furthermore, mRNA expression level was dramatically reduced consistent with nonsense mediated decay. Patient 3 was heterozygous for the p.R50X substitution, and patient 4 was heterozygous for the relatively common private Spanish mutation p.W798R. These two patients harboured a heterozygous exonic synonymous variant, p.K215K. Quantification of gene transcripts in patient 3 revealed a drastic decrease in the relative expression of the gene, which strongly supports the possibility of nonsense mediated decay.
Our results indicate that skeletal muscle cDNA studies in "genetic manifesting heterozygous" patients with McArdle disease are prone to identify their second mutant allele.
在McArdle病“遗传显性杂合子”患者中鉴定PYGM基因的致病突变等位基因,即那些通过基因组DNA分析仅能找到一个突变等位基因的患者。
我们研究了4名无亲缘关系的患者。采用聚合酶链反应-限制性片段长度多态性分析(PCR-RFLP)、基因测序和肌肉cDNA分析来寻找PYGM基因中的突变。通过计算机分析评估突变的影响,并通过实时聚合酶链反应(PCR)评估基因表达。
患者1为p.G205S错义突变和一种新的“框内”突变p.Q176_M177insVQ的复合杂合子,该突变是由于内含子4的3'端序列保留了6个核苷酸所致。患者2为常见的无义突变p.R50X以及一个1094 bp、从内含子16到内含子17序列的c.1969+214_2177+369del突变的杂合子。此外,mRNA表达水平显著降低,与无义介导的衰变一致。患者3为p.R50X替代的杂合子,患者4为相对常见的西班牙人特有的突变p.W798R的杂合子。这两名患者携带一个外显子同义变体p.K215K的杂合子。对患者3的基因转录本定量分析显示该基因的相对表达急剧下降,这有力地支持了无义介导衰变的可能性。
我们的结果表明,对McArdle病“遗传显性杂合子”患者进行骨骼肌cDNA研究易于鉴定其第二个突变等位基因。