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四种青霉属物种的prp8基因中的内含肽和内含子。

Inteins and introns within the prp8 -gene of four Eupenicillium species.

作者信息

Elleuche Skander, Pelikan Constantin, Nolting Nicole, Pöggeler Stefanie

机构信息

Georg-August Universität Göttingen, Institut für Mikrobiologie und Genetik, Abteilung für Genetik eukaryotischer Mikroorganismen, 37077 Göttingen, Germany.

出版信息

J Basic Microbiol. 2009 Feb;49(1):52-7. doi: 10.1002/jobm.200800168.

Abstract

Inteins are protein-intervening sequences that are translated with the host protein and can self-excise themselves post-translationally in an autocatalytic process. The flanking regions--called exteins--are then re-ligated with a new peptide bond, resulting in a mature host protein. Previously, we have identified inteins in the highly conserved 3.2 region of the PRP8 protein from species of the genus Penicillium. These inteins are integrated at the same position as that which has recently been described in PRP8 proteins from different strains of Cryptococcus neoformans and several ascomycetes. In this study, we investigated the presence of PRP8 inteins in four members of the genus Eupenicillium. Two species of this genus, Eupenicillium crustaceum and Eupenicillium baarnense, contain an intein at the same insertion site. Both inteins are mini-inteins and undergo self-splicing when heterologously expressed with a model host protein in Escherichia coli. Interestingly, we identified introns in the prp8-sequence encoding the 3.2 regions of the PRP8 protein in Eupenicillium meridianum and Eupenicillium terrenum. The introns are located 13 bps and 15 bps downstream of the putative intein insertion site. Here, we consider that the lack of inteins in these two species might be due to the prevention of endonuclease-mediated intein propagation in the intron-containing prp8-sequences.

摘要

内含肽是蛋白质中的插入序列,与宿主蛋白一起被翻译,并能在翻译后通过自催化过程自我切除。其侧翼区域(称为外显肽)随后通过新的肽键重新连接,从而产生成熟的宿主蛋白。此前,我们已在青霉属物种的PRP8蛋白高度保守的3.2区域中鉴定出内含肽。这些内含肽的整合位置与最近在新型隐球菌不同菌株和几种子囊菌的PRP8蛋白中所描述的位置相同。在本研究中,我们调查了优美青霉属四个成员中PRP8内含肽的存在情况。该属的两个物种,即甲壳优美青霉和巴恩斯优美青霉,在相同的插入位点含有一个内含肽。当与模型宿主蛋白在大肠杆菌中异源表达时,这两个内含肽均为微型内含肽并会进行自我剪接。有趣的是,我们在子午优美青霉和土生优美青霉中编码PRP8蛋白3.2区域的prp8序列中鉴定出了内含子。这些内含子位于假定内含肽插入位点下游13个碱基对和15个碱基对处。在此,我们认为这两个物种中缺乏内含肽可能是由于内含子包含的prp8序列中内切核酸酶介导的内含肽传播受到了阻碍。

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