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通过比较麻风分枝杆菌中18kDa小热休克蛋白及其突变体的模拟结构获得的功能见解。

Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae.

作者信息

Rehna Elengikal Abdul Azeez, Singh Sanjeev Kumar, Dharmalingam Kuppamuthu

机构信息

Department of Genetic Engineering, School of Biotechnology, Madurai Kamaraj University, Madurai-625021, Tamil Nadu, India.

出版信息

Bioinformation. 2008;3(5):230-4. doi: 10.6026/97320630003230. Epub 2008 Dec 31.

Abstract

In this work we are proposing Homology modeled structures of Mycobacterium leprae 18kDa heat shock protein and its mutant. The more closely related structure of the small heat shock protein (sHSP) belonging to the eukaryotic species from wheat sHSP16.9 and 16.3kDa ACR1 protein from Mycobacterium tuberculosis were used as template structures. Each model contains an N-terminal domain, alpha-crystalline domain and a C-terminal tail. The models showed that a single point mutation from serine to proline at 52(nd) position causes structural changes. The structural changes are observed in N-terminal region and alpha-crystalline domains. Serine in 52(nd) position is observed in beta4 strand and Proline in 52(nd) position is observed in loop. The number of residues contributing alpha helix at N-terminal region varies in both models. In 18S more number of residues is present in alpha helix when compared to 18P. The loop regions between beta3 and beta4 strands of both models vary in number of residues present in it. Number of residues contributing beta4 strand in both models vary. beta6 strand is absent in both models. Major functional peptide region of alpha crystalline domains of both models varies. These differences observed in secondary structures support their distinct functional roles. It also emphasizes that a point mutation can cause structural variation.

摘要

在这项工作中,我们提出了麻风分枝杆菌18kDa热休克蛋白及其突变体的同源建模结构。来自小麦的真核生物物种的小热休克蛋白(sHSP)的亲缘关系更密切的结构,即小麦sHSP16.9和结核分枝杆菌的16.3kDa ACR1蛋白,被用作模板结构。每个模型都包含一个N端结构域、α-晶状体结构域和一个C端尾巴。模型显示,第52位丝氨酸到脯氨酸的单点突变会导致结构变化。在N端区域和α-晶状体结构域观察到结构变化。在β4链中观察到第52位的丝氨酸,在环中观察到第52位的脯氨酸。两个模型中在N端区域形成α螺旋的残基数量不同。与18P相比,18S中α螺旋中存在更多的残基。两个模型中β3和β4链之间的环区域中存在的残基数量不同。两个模型中形成β4链的残基数量不同。两个模型中均不存在β6链。两个模型的α晶状体结构域的主要功能肽区域不同。在二级结构中观察到的这些差异支持了它们不同的功能作用。这也强调了一个点突变可以导致结构变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a158/2646194/c1e4ee4f8816/97320630003230F1.jpg

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