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源自小分子热休克蛋白Tpv HSP 14.3的α-晶状体蛋白结构域的小肽的抗聚集特性

Anti-aggregation Properties of the Mini-Peptides Derived from Alpha Crystallin Domain of the Small Heat Shock Protein, Tpv HSP 14.3.

作者信息

Zabcı Sema, Kocabıyık Semra

机构信息

Department of Biological Sciences, Faculty of Arts and Science, Middle East Technical University, 06800, Ankara, Türkiye.

Department of Molecular Biology and Genetics, Faculty of Arts and Science, Baskent University, 06790, Ankara, Türkiye.

出版信息

Mol Biotechnol. 2024 Dec 8. doi: 10.1007/s12033-024-01332-1.

Abstract

The highly conserved alpha crystallin domain of the small heat shock proteins is essential for dimerization and also implicated in substrate interaction. In this study, we designed four novel mini-peptides from alpha crystallin domain of archaeal Small Heat Shock Protein Tpv HSP 14.3. Among the peptide designs, the mini-peptides SDLVLEAEMAGFDKKNIKVS and LVLEAEMAGFD overlapped to the sequences of β3-β4 region. The other two peptides YIDQRVDKVYKVVKLPVE and GILTVRMK correspond to β6-β7 region and β9, respectively. Functional activity of the peptides was evaluated by monitoring heat-induced aggregation of the model substrates alcohol dehydrogenase at 43 °C and citrate synthase at 45 °C. Our results showed that the (38-57) and the (77-94) fragments exhibited chaperone activity with both of the substrate proteins. The (40-50) fragment while exhibiting a noticeable protective effect (> 90%) when tested with citrate synthase showed an anti-chaperone property toward alcohol dehydrogenase. Unlike the (40-50) fragment, the (107-114) fragment did not show any chaperone activity with citrate synthase but exhibited the highest chaperone efficiency among four mini-peptides with alcohol dehydrogenase. The selectivity of the (40-50) and the (107-114) fragments in targeting the client proteins is most likely dependent on their surface hydrophobicity and/or charge as revealed by the sequence and exposed surface analyses.

摘要

小分子热休克蛋白高度保守的α晶状体蛋白结构域对于二聚化至关重要,并且也与底物相互作用有关。在本研究中,我们从古菌小分子热休克蛋白Tpv HSP 14.3的α晶状体蛋白结构域设计了四种新型小肽。在这些肽设计中,小肽SDLVLEAEMAGFDKKNIKVS和LVLEAEMAGFD与β3-β4区域的序列重叠。另外两种肽YIDQRVDKVYKVVKLPVE和GILTVRMK分别对应于β6-β7区域和β9。通过监测43℃下模型底物乙醇脱氢酶和45℃下柠檬酸合酶的热诱导聚集来评估这些肽的功能活性。我们的结果表明,(38-57)和(77-94)片段对两种底物蛋白均表现出伴侣活性。(40-50)片段在用柠檬酸合酶测试时表现出显著的保护作用(>90%),但对乙醇脱氢酶表现出抗伴侣特性。与(40-50)片段不同,(107-114)片段对柠檬酸合酶未表现出任何伴侣活性,但在四种小肽中对乙醇脱氢酶表现出最高的伴侣效率。如序列和暴露表面分析所示,(40-50)和(107-114)片段在靶向客户蛋白方面的选择性很可能取决于它们的表面疏水性和/或电荷。

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