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关于视紫红质(一种G蛋白偶联受体的功能中间体)中碳-13化学位移的解释

Towards an interpretation of 13C chemical shifts in bathorhodopsin, a functional intermediate of a G-protein coupled receptor.

作者信息

Gansmüller Axel, Concistrè Maria, McLean Neville, Johannessen Ole G, Marín-Montesinos Ildefonso, Bovee-Geurts Petra H M, Verdegem Peter, Lugtenburg Johan, Brown Richard C D, Degrip Willem J, Levitt Malcolm H

机构信息

School of Chemistry, University of Southampton, SO17 1BJ Southampton, England, UK.

出版信息

Biochim Biophys Acta. 2009 Jun;1788(6):1350-7. doi: 10.1016/j.bbamem.2009.02.018. Epub 2009 Mar 3.

DOI:10.1016/j.bbamem.2009.02.018
PMID:19265671
Abstract

Photoisomerization of the membrane-bound light receptor protein rhodopsin leads to an energy-rich photostate called bathorhodopsin, which may be trapped at temperatures of 120 K or lower. We recently studied bathorhodopsin by low-temperature solid-state NMR, using in situ illumination of the sample in a purpose-built NMR probe. In this way we acquired (13)C chemical shifts along the retinylidene chain of the chromophore. Here we compare these results with the chemical shifts of the dark state chromophore in rhodopsin, as well as with the chemical shifts of retinylidene model compounds in solution. An earlier solid-state NMR study of bathorhodopsin found only small changes in the (13)C chemical shifts upon isomerization, suggesting only minor perturbations of the electronic structure in the isomerized retinylidene chain. This is at variance with our recent measurements which show much larger perturbations of the (13)C chemical shifts. Here we present a tentative interpretation of our NMR results involving an increased charge delocalization inside the polyene chain of the bathorhodopsin chromophore. Our results suggest that the bathochromic shift of bathorhodopsin is due to modified electrostatic interactions between the chromophore and the binding pocket, whereas both electrostatic interactions and torsional strain are involved in the energy storage mechanism of bathorhodopsin.

摘要

膜结合光受体蛋白视紫红质的光异构化会导致一种称为视紫红质中间体的高能光状态,在120 K或更低的温度下可能会被捕获。我们最近通过低温固态核磁共振研究视紫红质中间体,在专门构建的核磁共振探头中对样品进行原位光照。通过这种方式,我们获得了发色团视黄叉链上的(13)C化学位移。在此,我们将这些结果与视紫红质中暗态发色团的化学位移以及溶液中视黄叉模型化合物的化学位移进行比较。早期对视紫红质中间体的固态核磁共振研究发现,异构化后(13)C化学位移只有微小变化,这表明异构化视黄叉链中的电子结构只有轻微扰动。这与我们最近的测量结果不同,我们的测量结果显示(13)C化学位移有更大的扰动。在此,我们对核磁共振结果提出一种初步解释,涉及视紫红质中间体发色团多烯链内电荷离域增加。我们的结果表明,视紫红质中间体的红移是由于发色团与结合口袋之间的静电相互作用改变,而静电相互作用和扭转应变都参与了视紫红质中间体的能量储存机制。

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Towards an interpretation of 13C chemical shifts in bathorhodopsin, a functional intermediate of a G-protein coupled receptor.关于视紫红质(一种G蛋白偶联受体的功能中间体)中碳-13化学位移的解释
Biochim Biophys Acta. 2009 Jun;1788(6):1350-7. doi: 10.1016/j.bbamem.2009.02.018. Epub 2009 Mar 3.
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NMR chemical shifts of the rhodopsin chromophore in the dark state and in bathorhodopsin: a hybrid QM/MM molecular dynamics study.视紫红质发色团在暗态和视紫红质初生态中的核磁共振化学位移:一项量子力学/分子力学混合分子动力学研究
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13C magic-angle spinning NMR studies of bathorhodopsin, the primary photoproduct of rhodopsin.视紫红质的初级光产物视紫红质的13C魔角旋转核磁共振研究。
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Retinylidene ligand structure in bovine rhodopsin, metarhodopsin-I, and 10-methylrhodopsin from internuclear distance measurements using 13C-labeling and 1-D rotational resonance MAS NMR.利用¹³C标记和一维旋转共振MAS NMR通过核间距离测量确定牛视紫红质、变视紫红质-I和10-甲基视紫红质中的视黄叉配体结构。
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FTIR spectroscopy reveals microscopic structural changes of the protein around the rhodopsin chromophore upon photoisomerization.傅里叶变换红外光谱显示,视紫红质发色团在光异构化时,其周围蛋白质的微观结构发生了变化。
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NMR constraints on the location of the retinal chromophore in rhodopsin and bathorhodopsin.核磁共振对视紫红质和视紫蓝质中视网膜发色团位置的限制。
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Protein-induced bonding perturbation of the rhodopsin chromophore detected by double-quantum solid-state NMR.
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Light penetration and photoisomerization in rhodopsin studied by numerical simulations and double-quantum solid-state NMR spectroscopy.
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A large geometric distortion in the first photointermediate of rhodopsin, determined by double-quantum solid-state NMR.双量子固态 NMR 测定的视紫红质第一光中间产物中的大几何变形。
J Biomol NMR. 2012 Jul;53(3):247-56. doi: 10.1007/s10858-012-9635-4. Epub 2012 May 26.
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Cryogenic temperature effects and resolution upon slow cooling of protein preparations in solid state NMR.
在固态 NMR 中,蛋白制剂在缓慢冷却时的低温效应和分辨率。
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QM/MM study of the structure, energy storage, and origin of the bathochromic shift in vertebrate and invertebrate bathorhodopsins.脊椎动物和无脊椎动物视紫红质结构、能量存储和红移起源的QM/MM 研究。
J Am Chem Soc. 2011 Apr 6;133(13):4734-7. doi: 10.1021/ja200322w. Epub 2011 Mar 10.
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Structure and function of G protein-coupled receptors using NMR spectroscopy.利用核磁共振光谱法研究G蛋白偶联受体的结构与功能
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