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在一个人群隔离群体中,收缩压的一个数量性状基因座定位在KCNB1和PTGIS附近。

A quantitative trait locus for SBP maps near KCNB1 and PTGIS in a population isolate.

作者信息

Barbalić Maja, Narancić Nina Smolej, Skarić-Jurić Tatjana, Salihović Marijana Pericić, Klarić Irena Martinović, Lauc Lovorka Barać, Janićijević Branka, Farrall Martin, Rudan Igor, Campbell Harry, Wright Alan F, Hastie Nicholas D, Rudan Pavao

机构信息

Institute for Anthropological Research, Zagreb, Croatia.

出版信息

Am J Hypertens. 2009 Jun;22(6):663-8. doi: 10.1038/ajh.2009.46. Epub 2009 Mar 5.

Abstract

BACKGROUND

Population isolates are characterized by simplified genetic background and as such present promising opportunities for studying complex diseases. We performed a genome-wide linkage analysis for systolic (SBP) and diastolic blood pressure (DBP) followed up by the association analysis in the Croatian isolated island of Vis, where a very high prevalence of hypertension was reported (75%).

METHODS

Variance-components linkage analysis was used to map quantitative trait loci (QTL) for SBP and DBP in 125 families with 1,389 members. Follow-up association analysis was performed in a sample of 421 subjects from the island of Vis. The 15 top-ranking single nucleotide polymorphisms (SNPs) were selected and tested for the association by in silico replication in the British 1958 Birth Cohort DNA Collection.

RESULTS

Linkage results showed evidence for a QTL influencing DBP (lod = 1.89) on chromosome 7p14.2 and two QTL influencing SBP (lod = 2.03 on chromosome 1p36 and lod = 1.75 on chromosome 20q13). For the association results, the replication was observed for the rs237484 polymorphism on chromosome 20 that was associated with SBP with the effect size beta = -5.2 (P = 0.001; per A allele) in Vis population and beta = -1.1 (P = 0.04) in the British 1958 Birth Cohort. rs237484 is in proximity to the potassium voltage gate channel gene (KCNB1) and close to the prostaglandin I2 (prostacyclin) synthase gene (PTGIS).

CONCLUSIONS

These results provide evidence of a QTL influencing blood pressure (BP) variability in this region and support the notion that the isolated population of the island of Vis is a suitable population for conducting linkage and association analyses of cardiovascular-related phenotypes.

摘要

背景

人群隔离群具有简化的遗传背景,因此为研究复杂疾病提供了有前景的机会。我们在克罗地亚的维斯隔离岛进行了全基因组连锁分析,以研究收缩压(SBP)和舒张压(DBP),随后进行关联分析,该岛报告的高血压患病率非常高(75%)。

方法

采用方差成分连锁分析在125个家庭(共1389名成员)中定位SBP和DBP的数量性状位点(QTL)。在来自维斯岛的421名受试者样本中进行了后续关联分析。选择了15个排名靠前的单核苷酸多态性(SNP),并通过在英国1958年出生队列DNA样本库中的电子复制来测试其关联性。

结果

连锁分析结果显示,在7号染色体p14.2区域有一个影响DBP的QTL(对数优势比 = 1.89),以及两个影响SBP的QTL(1号染色体p36区域对数优势比 = 2.03,20号染色体q13区域对数优势比 = 1.75)。对于关联分析结果,在20号染色体上的rs237484多态性观察到了复制现象,该多态性在维斯人群中与SBP相关,效应大小β = -5.2(P = 0.001;每A等位基因),在英国1958年出生队列中β = -1.1(P = 0.04)。rs237484靠近钾离子电压门通道基因(KCNB1)且接近前列腺素I2(前列环素)合酶基因(PTGIS)。

结论

这些结果为该区域存在影响血压(BP)变异性的QTL提供了证据,并支持以下观点:维斯岛的隔离人群是进行心血管相关表型的连锁和关联分析的合适人群。

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