Ogasawara Hironobu, Obata Hiroshi, Hata Yoji, Takahashi Saori, Gomi Katsuya
Department of Bioindustrial Informatics and Genomics, Graduate School of Agricultural Science, Tohoku University, Tsutsumidori-Amamiyamachi Aoba-ku, Sendai, Japan.
Fungal Genet Biol. 2009 Jun-Jul;46(6-7):441-9. doi: 10.1016/j.fgb.2009.02.007. Epub 2009 Mar 6.
A novel active transposable element, designated Crawler, has been isolated from an industrial strain (OSI1013) of Aspergillus oryzae as an insertion sequence within the niaD gene encoding nitrate reductase. It is 1290bp in length with imperfect terminal inverted repeats of 28bp and is flanked by 2bp (TA) target site duplications. It contains an open reading frame with no introns that encodes a putative transposase (AotA) of 357 amino acid residues, which is highly homologous to the transposase existing in impala, a member of Tc1/mariner superfamily class II DNA transposon from Fusarium oxysporum. Southern blot analysis revealed that the OSI1013 strain has multiple copies (at least 16) of the element in the genome. Transcription of Crawler occurred under standard growth conditions, and was up-regulated in the presence of CuSO(4) or by heat shock at 42 degrees C. Moreover, transposition events of Crawler induced by various stress treatments were observed by transposon trapping, in which crnA and niaD genes were used as targets for insertion of the element. The excision analysis of Crawler inserted within promoter regions of the crnA gene revealed that CuSO(4) stress and heat shock treatment for conidia were most effective on its excision/transposition, and that acidic environment, oxidative stress, and UV irradiation also slightly induced transposition. To our knowledge, this is the first study reporting the observation of active transpositions of a resident class II transposon under various stress conditions in filamentous fungi.
一种名为Crawler的新型活性转座元件,作为编码硝酸还原酶的niaD基因内的插入序列,已从米曲霉的工业菌株(OSI1013)中分离出来。它长度为1290bp,具有28bp的不完全末端反向重复序列,两侧是2bp(TA)的靶位点重复序列。它包含一个无内含子的开放阅读框,编码一个357个氨基酸残基的推定转座酶(AotA),该转座酶与尖孢镰刀菌的Tc1/水手超家族II类DNA转座子成员黑斑羚中存在的转座酶高度同源。Southern印迹分析表明,OSI1013菌株在基因组中有该元件的多个拷贝(至少16个)。Crawler在标准生长条件下发生转录,在CuSO₄存在或42℃热休克时上调。此外,通过转座子捕获观察到各种应激处理诱导的Crawler转座事件,其中crnA和niaD基因用作该元件插入的靶标。对插入crnA基因启动子区域内的Crawler进行的切除分析表明,CuSO₄应激和分生孢子的热休克处理对其切除/转座最有效,酸性环境、氧化应激和紫外线照射也略微诱导转座。据我们所知,这是第一项报道丝状真菌中II类常驻转座子在各种应激条件下活性转座观察结果的研究。