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Folyt1是hAT家族的一个新成员,在植物病原体尖孢镰刀菌的基因组中具有活性。

Folyt1, a new member of the hAT family, is active in the genome of the plant pathogen Fusarium oxysporum.

作者信息

Gómez-Gómez E, Anaya N, Roncero M I, Hera C

机构信息

Departamento de Genética, Facultad de Ciencias, Córdoba, Spain.

出版信息

Fungal Genet Biol. 1999 Jun;27(1):67-76. doi: 10.1006/fgbi.1999.1132.

Abstract

An active transposable element, Folyt1, has been isolated from the tomato pathogen Fusarium oxysporum f. sp. lycopersici as an insertion sequence within the coding region of the nitrate reductase gene (nit 1) in two independent mutants (CO66 and CO108). Folyt1 was 2615 bp in length and contained 9-bp imperfect inverted terminal repeats (ITRs) and 8 bp duplicated at the target site upon insertion. The element contained a long open reading frame interrupted by a single putative intron. The predicted amino acid sequence showed similarity to conserved domains of transposases from hobo, Ac, and Tam3 elements, which belong to the hAT family. The excision frequency of Folyt1 was determined to be less than 10(-5) in both mutants. These events restored the nit 1 wild-type allele without leaving footprints in all the revertants of strain CO66. Nevertheless, some revertants of strain CO108 showed a point mutation footprint at the target sequence. Expression of the Folyt1 transposase was detected by Northern analysis as a 2.1-kb transcript. The element exists in about 10 copies per genome in F. oxysporum f. sp. lycopersici and appears to be widely distributed among different formae speciales of F. oxysporum.

摘要

一个活跃的转座元件Folyt1已从番茄病原菌尖孢镰刀菌番茄专化型中分离出来,它作为硝酸盐还原酶基因(nit 1)编码区内的插入序列存在于两个独立的突变体(CO66和CO108)中。Folyt1长度为2615 bp,含有9 bp的不完全反向末端重复序列(ITRs),插入时在靶位点有8 bp的重复序列。该元件包含一个被单个推定内含子打断的长开放阅读框。预测的氨基酸序列与属于hAT家族的hobo、Ac和Tam3元件转座酶的保守结构域相似。在两个突变体中,Folyt1的切除频率均测定为小于10^(-5)。这些事件恢复了nit 1野生型等位基因,且在菌株CO66的所有回复突变体中均未留下痕迹。然而,菌株CO108的一些回复突变体在靶序列处显示出一个点突变痕迹。通过Northern分析检测到Folyt1转座酶的表达为一个2.1 kb的转录本。该元件在尖孢镰刀菌番茄专化型的每个基因组中约有10个拷贝,并且似乎在尖孢镰刀菌的不同专化型中广泛分布。

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