Yang Gang, Zu Yuangang, Fu Yujie, Zhou Lijun, Zhu Rongxiu, Liu Chengbu
Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China.
J Phys Chem B. 2009 Apr 9;113(14):4899-906. doi: 10.1021/jp808741c.
Density functional calculations were employed to stabilize multi-amino acid zwitterions by metal ions as well as to understand the stabilizing mechanism. This work distinguishes from the previous metalations and stabilizations of a single amino acid zwitterion, where the metal ions are coordination-unsaturated. It was found that up to three Gly zwitterions can be stabilized by the Zn(2+) ion at the same time. The addition of the fourth Gly zwitterion to the Zn(Gly)(3) system causes the spontaneous transformation of one zwitterion to the neutral isomer. The single mutations of Gly in Zn(Gly)(4) with Arg or Asp render the Zn(2+)-combined four amino acid zwitterions geometrically stable. The double mutation of Gly with Arg further stabilizes the structure with four amino acid zwitterions, with its energy being lower than the one containing one neutral and three zwitterionic isomers. The systematic studies on a series of M-combined amino acid systems (M = Zn(2+), Zn(+), Li(+), Na(+)) indicated that enough charge transfers from the metal ions are essential to stabilize the amino acid zwitterions. There exist critical values of charge transfers, and for Zn(2+)-combined amino acid systems, an estimation of 0.20 |e| is required to stabilize each Gly zwitterion. Further analysis revealed that the charge transfers rather than the formations of direct M-O bonds play a more important role in the stabilizations of amino acid zwitterions.
采用密度泛函计算来通过金属离子稳定多氨基酸两性离子,并理解其稳定机制。这项工作与之前对单个氨基酸两性离子的金属化和稳定化不同,之前的情况中金属离子是配位不饱和的。研究发现,Zn(2+)离子可同时稳定多达三个甘氨酸两性离子。向Zn(Gly)₃体系中添加第四个甘氨酸两性离子会导致一个两性离子自发转变为中性异构体。在Zn(Gly)₄中用精氨酸或天冬氨酸对甘氨酸进行单突变,使得与Zn(2+)结合的四个氨基酸两性离子在几何结构上稳定。甘氨酸与精氨酸的双突变进一步稳定了含有四个氨基酸两性离子的结构,其能量低于含有一个中性异构体和三个两性离子异构体的结构。对一系列M结合氨基酸体系(M = Zn(2+)、Zn(+)、Li(+)、Na(+))的系统研究表明,来自金属离子的足够电荷转移对于稳定氨基酸两性离子至关重要。存在电荷转移的临界值,对于与Zn(2+)结合的氨基酸体系,稳定每个甘氨酸两性离子需要估计0.20 |e|的电荷转移。进一步分析表明,电荷转移而非直接M - O键的形成在氨基酸两性离子的稳定化中起更重要的作用。