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由两种乳球菌噬菌体构建的嵌合受体结合蛋白的晶体结构

Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages.

作者信息

Siponen Marina, Spinelli Silvia, Blangy Stéphanie, Moineau Sylvain, Cambillau Christian, Campanacci Valérie

机构信息

Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS, and Universités Aix-Marseille I & II, Campus de Luminy, Case 932, 13288 Marseille Cedex 09, France.

出版信息

J Bacteriol. 2009 May;191(10):3220-5. doi: 10.1128/JB.01637-08. Epub 2009 Mar 13.

Abstract

Lactococcus lactis, a gram-positive bacterium widely used by the dairy industry to manufacture cheeses, is subject to infection by a diverse population of virulent phages. We have previously determined the structures of three receptor binding proteins (RBPs) from lactococcal phages TP901-1, p2, and bIL170, each of them having a distinct host range. Virulent phages p2 and bIL170 are classified within the 936 group, while the temperate phage TP901-1 is a member of the genetically distinct P335 polythetic group. These RBPs comprise three domains: the N-terminal domain, binding to the virion particle; a beta-helical linker domain; and the C-terminal domain, bearing the receptor binding site used for host recognition. Here, we have designed, expressed, and determined the structure of an RBP chimera in which the N-terminal and linker RBP domains of phage TP901-1 (P335) are fused to the C-terminal RBP domain of phage p2 (936). This chimera exhibits a stable structure that closely resembles the parental structures, while a slight displacement of the linker made RBP domain adaptation efficient. The receptor binding site is structurally indistinguishable from that of native p2 RBP and binds glycerol with excellent affinity.

摘要

乳酸乳球菌是一种革兰氏阳性菌,被乳制品行业广泛用于制造奶酪,它会受到多种烈性噬菌体的感染。我们之前已经确定了来自乳球菌噬菌体TP901-1、p2和bIL170的三种受体结合蛋白(RBP)的结构,它们各自具有不同的宿主范围。烈性噬菌体p2和bIL170属于936组,而温和噬菌体TP901-1是遗传上不同的P335多型群的成员。这些RBP包含三个结构域:与病毒粒子结合的N端结构域;一个β-螺旋连接结构域;以及带有用于宿主识别的受体结合位点的C端结构域。在这里,我们设计、表达并确定了一种RBP嵌合体的结构,其中噬菌体TP901-1(P335)的N端和连接RBP结构域与噬菌体p2(936)的C端RBP结构域融合。这种嵌合体呈现出一种与亲本结构非常相似的稳定结构,而连接结构域的轻微位移使RBP结构域的适配变得高效。该受体结合位点在结构上与天然p2 RBP的受体结合位点无法区分,并且以优异的亲和力结合甘油。

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