Day Graeme M, Cooper Timothy G, Cruz-Cabeza Aurora J, Hejczyk Katarzyna E, Ammon Herman L, Boerrigter Stephan X M, Tan Jeffrey S, Della Valle Raffaele G, Venuti Elisabetta, Jose Jovan, Gadre Shridhar R, Desiraju Gautam R, Thakur Tejender S, van Eijck Bouke P, Facelli Julio C, Bazterra Victor E, Ferraro Marta B, Hofmann Detlef W M, Neumann Marcus A, Leusen Frank J J, Kendrick John, Price Sarah L, Misquitta Alston J, Karamertzanis Panagiotis G, Welch Gareth W A, Scheraga Harold A, Arnautova Yelena A, Schmidt Martin U, van de Streek Jacco, Wolf Alexandra K, Schweizer Bernd
The Pfizer Institute for Pharmaceutical Materials Science, University Chemical Laboratory, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, England.
Acta Crystallogr B. 2009 Apr;65(Pt 2):107-25. doi: 10.1107/S0108768109004066. Epub 2009 Mar 16.
We report on the organization and outcome of the fourth blind test of crystal structure prediction, an international collaborative project organized to evaluate the present state in computational methods of predicting the crystal structures of small organic molecules. There were 14 research groups which took part, using a variety of methods to generate and rank the most likely crystal structures for four target systems: three single-component crystal structures and a 1:1 cocrystal. Participants were challenged to predict the crystal structures of the four systems, given only their molecular diagrams, while the recently determined but as-yet unpublished crystal structures were withheld by an independent referee. Three predictions were allowed for each system. The results demonstrate a dramatic improvement in rates of success over previous blind tests; in total, there were 13 successful predictions and, for each of the four targets, at least two groups correctly predicted the observed crystal structure. The successes include one participating group who correctly predicted all four crystal structures as their first ranked choice, albeit at a considerable computational expense. The results reflect important improvements in modelling methods and suggest that, at least for the small and fairly rigid types of molecules included in this blind test, such calculations can be constructively applied to help understand crystallization and polymorphism of organic molecules.
我们报告了晶体结构预测第四次盲测的组织情况及结果。该盲测是一个国际合作项目,旨在评估预测小分子有机化合物晶体结构的计算方法的当前水平。共有14个研究小组参与,他们使用了各种方法来生成并排列四个目标体系最可能的晶体结构:三个单组分晶体结构和一个1:1共晶体。只给出分子图的情况下,参与者面临预测这四个体系晶体结构的挑战,而最近测定但尚未发表的晶体结构由一位独立评审员保留。每个体系允许进行三次预测。结果表明,与之前的盲测相比,成功率有了显著提高;总共成功预测了13次,对于四个目标中的每一个,至少有两个小组正确预测了观察到的晶体结构。成功案例包括一个参与小组,该小组以相当高的计算成本,将所有四个晶体结构都正确预测为其首选。这些结果反映了建模方法的重要改进,并表明,至少对于此次盲测中包含的小且相当刚性的分子类型,此类计算可被建设性地应用,以帮助理解有机分子的结晶和多晶型现象。