Department of Bioengineering, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy.
Int J Mol Sci. 2008 Oct;9(10):1927-1943. doi: 10.3390/ijms9101927. Epub 2008 Oct 13.
The mechanics of the actomyosin interaction is central in muscle contraction and intracellular trafficking. A better understanding of the events occurring in the actomyosin complex requires the examination of all nucleotide-dependent states and of the energetic features associated with the dynamics of the cross-bridge cycle. The aim of the present study is to estimate the interaction strength between myosin in nucleotide-free, ATP, ADP.Pi and ADP states and actin monomer. The molecular models of the complexes were constructed based on cryo-electron microscopy maps and the interaction properties were estimated by means of a molecular dynamics approach, which simulate the unbinding of the complex applying a virtual spring to the core of myosin protein. Our results suggest that during an ATP hydrolysis cycle the affinity of myosin for actin is modulated by the presence and nature of the nucleotide in the active site of the myosin motor domain. When performing unbinding simulations with a pulling rate of 0.001 nm/ps, the maximum pulling force applied to the myosin during the experiment is about 1nN. Under these conditions the interaction force between myosin and actin monomer decreases from 0.83 nN in the nucleotide-free state to 0.27 nN in the ATP state, and increases to 0.60 nN after ATP hydrolysis and Pi release from the complex (ADP state).
肌球蛋白与肌动蛋白相互作用的机制在肌肉收缩和细胞内运输中起着核心作用。要更好地理解肌球蛋白复合物中发生的事件,需要检查所有依赖核苷酸的状态,以及与横桥循环动力学相关的能量特征。本研究的目的是估计无核苷酸、ATP、ADP.Pi 和 ADP 状态下肌球蛋白与肌动蛋白单体之间的相互作用强度。复合物的分子模型是基于低温电子显微镜图谱构建的,通过分子动力学方法来估计相互作用特性,该方法通过向肌球蛋白蛋白核心施加虚拟弹簧来模拟复合物的解结合。我们的研究结果表明,在 ATP 水解循环过程中,肌球蛋白与肌动蛋白的亲和力受肌球蛋白马达结构域活性位点中核苷酸的存在和性质的调节。当以 0.001nm/ps 的拉动速率进行解结合模拟时,实验中施加给肌球蛋白的最大拉力约为 1nN。在这些条件下,肌球蛋白与肌动蛋白单体之间的相互作用力从无核苷酸状态下的 0.83nN 降低到 ATP 状态下的 0.27nN,并且在 ATP 水解和从复合物中释放 Pi(ADP 状态)后增加到 0.60nN。