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产朊假丝酵母木糖还原酶催化依赖烟酰胺腺嘌呤二核苷酸(NADH)还原9,10-菲醌的机制揭示了醛酮还原酶活性位点的可塑性。

The catalytic mechanism of NADH-dependent reduction of 9,10-phenanthrenequinone by Candida tenuis xylose reductase reveals plasticity in an aldo-keto reductase active site.

作者信息

Pival Simone L, Klimacek Mario, Nidetzky Bernd

机构信息

Institute of Biotechnology and Biochemical Engineering, Petersgasse 12, Graz University of Technology, A-8010 Graz, Austria.

出版信息

Biochem J. 2009 Jun 12;421(1):43-9. doi: 10.1042/BJ20090128.

Abstract

Despite their widely varying physiological functions in carbonyl metabolism, AKR2B5 (Candida tenuis xylose reductase) and many related enzymes of the aldo-keto reductase protein superfamily utilise PQ (9,10-phenanthrenequinone) as a common in vitro substrate for NAD(P)H-dependent reduction. The catalytic roles of the conserved active-site residues (Tyr51, Lys80 and His113) of AKR2B5 in the conversion of the reactive alpha-dicarbonyl moiety of PQ are not well understood. Using wild-type and mutated (Tyr51, Lys80 and His113 individually replaced by alanine) forms of AKR2B5, we have conducted steady-state and transient kinetic studies of the effects of varied pH and deuterium isotopic substitutions in coenzyme and solvent on the enzymatic rates of PQ reduction. Each mutation caused a 10(3)-10(4)-fold decrease in the rate constant for hydride transfer from NADH to PQ, whose value in the wild-type enzyme was determined as approximately 8 x 10(2) s(-1). The data presented support an enzymic mechanism in which a catalytic proton bridge from the protonated side chain of Lys80 (pK=8.6+/-0.1) to the carbonyl group adjacent to the hydride acceptor carbonyl facilitates the chemical reaction step. His113 contributes to positioning of the PQ substrate for catalysis. Contrasting its role as catalytic general acid for conversion of the physiological substrate xylose, Tyr51 controls release of the hydroquinone product. The proposed chemistry of AKR2B5 action involves delivery of both hydrogens required for reduction of the alpha-dicarbonyl substrate to the carbonyl group undergoing (stereoselective) transformation. Hydride transfer from NADH probably precedes the transfer of a proton from Tyr51 whose pK of 7.3+/-0.3 in the NAD+-bound enzyme appears suitable for protonation of a hydroquinone anion (pK=8.8). These results show that the mechanism of AKR2B5 is unusually plastic in the exploitation of the active-site residues, for the catalytic assistance provided to carbonyl group reduction in alpha-dicarbonyls differs from that utilized in the conversion of xylose.

摘要

尽管醛糖酮还原酶2B5(季也蒙毕赤酵母木糖还原酶)及其醛酮还原酶蛋白超家族的许多相关酶在羰基代谢中的生理功能差异很大,但它们都利用菲醌(9,10-菲醌,PQ)作为烟酰胺腺嘌呤二核苷酸(磷酸)(NAD(P)H)依赖性还原反应的常见体外底物。醛糖酮还原酶2B5中保守活性位点残基(酪氨酸51、赖氨酸80和组氨酸113)在PQ反应性α-二羰基部分转化中的催化作用尚不清楚。我们使用野生型和突变型(酪氨酸51、赖氨酸80和组氨酸113分别被丙氨酸取代)的醛糖酮还原酶2B5,进行了稳态和瞬态动力学研究,考察了辅酶和溶剂中不同pH值以及氘同位素取代对PQ还原酶促反应速率的影响。每种突变都导致从NADH向PQ转移氢化物的速率常数下降10³ - 10⁴倍,野生型酶中该值测定约为8×10² s⁻¹。所呈现的数据支持一种酶促机制,即从赖氨酸80质子化侧链(pK = 8.6±0.1)到氢化物受体羰基相邻羰基的催化质子桥促进化学反应步骤。组氨酸113有助于PQ底物定位以进行催化。与它作为生理底物木糖转化的催化通用酸的作用形成对比的是,酪氨酸51控制对苯二酚产物的释放。醛糖酮还原酶2B5作用的拟议化学过程涉及将α-二羰基底物还原所需的两个氢都传递到进行(立体选择性)转化的羰基上。氢化物从NADH转移可能先于质子从酪氨酸51转移,其在结合NAD⁺的酶中的pK为7.3±0.3,似乎适合使对苯二酚阴离子(pK = 8.8)质子化。这些结果表明,醛糖酮还原酶2B5的机制在利用活性位点残基方面具有异常的可塑性,因为对α-二羰基中羰基还原提供的催化辅助与木糖转化中利用的不同。

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