Yantai Institute of Coastal Zone Research for Sustainable Development, Chinese Academy of Sciences, Yantai, China.
Mol Biol Rep. 2010 Mar;37(3):1451-60. doi: 10.1007/s11033-009-9534-2. Epub 2009 Apr 19.
We report here a cDNA and its deduced amino acid sequence encoding a cathepsin D-like, aspartic protease from Chlamys farreri (denoted as CfCD) by expressed sequence tag and rapid amplification of cDNA ends techniques. The cDNA of CfCD consisted of 1,810 nucleotides with a canonical polyadenylation signal sequence AATAAA and a polyA tail, encoding a short signal peptide of 18 amino acids, a pro-enzyme peptide of 29 amino acid residues, and a mature enzyme of 349 residues. The deduced amino acid sequence of CfCD was significant homology to CDs from human, fish and invertebrates. Two conserved catalytic motifs (VFDTGSSNLWV and AIADTGTSLLVG) and two potential N-glycosylation sites were also identified in the deduced amino acid sequence of CfCD. All this characteristics indicated CfCD should be a member of CDs family. The mRNA spatial expression of CfCD in mantle, gonad, gill, hemocytes, hepatopancreas and adductor muscle was examined by quantitative real-time PCR. mRNA transcripts of CfCD could be detected in all tissues with the highest expression level in hepatopancreas. After 8 h Vibrio anguillarum challenge, the expression level of CfCD changed significantly in all examined tissues except mantle (P = 0.183) and hemocytes (P = 0.069). The information generated in the present study would be helpful for future studies aiming at investigating the detailed functions of cathepsin D from marine invertebrates.
我们通过表达序列标签和快速扩增 cDNA 末端技术报告了来自栉孔扇贝(Chlamys farreri)的组织蛋白酶 D 样天冬氨酸蛋白酶的 cDNA 及其推导的氨基酸序列(表示为 CfCD)。CfCD 的 cDNA 由 1810 个核苷酸组成,具有典型的聚腺苷酸化信号序列 AATAAA 和 polyA 尾巴,编码 18 个氨基酸的短信号肽、29 个氨基酸残基的前酶肽和 349 个氨基酸残基的成熟酶。CfCD 的推导氨基酸序列与来自人类、鱼类和无脊椎动物的 CDs 具有显著同源性。在 CfCD 的推导氨基酸序列中还鉴定出两个保守的催化基序(VFDTGSSNLWV 和 AIADTGTSLLVG)和两个潜在的 N-糖基化位点。所有这些特征表明 CfCD 应该是 CDs 家族的成员。通过定量实时 PCR 检测 CfCD 在套膜、性腺、鳃、血细胞、肝胰腺和闭壳肌中的 mRNA 空间表达。在所有组织中都可以检测到 CfCD 的 mRNA 转录本,其中肝胰腺中的表达水平最高。在 8 h 鳗弧菌攻毒后,除套膜(P = 0.183)和血细胞(P = 0.069)外,所有检测组织中 CfCD 的表达水平均发生显著变化。本研究中获得的信息将有助于未来研究调查海洋无脊椎动物组织蛋白酶 D 的详细功能。