Bean G J, Flickinger S T, Westler W M, McCully M E, Sept D, Weibel D B, Amann K J
Laboratory of Molecular Biology, University of Wisconsin, 1525 Linden Drive, Madison, Wisconsin 53706, USA.
Biochemistry. 2009 Jun 9;48(22):4852-7. doi: 10.1021/bi900014d.
S-(3,4-Dichlorobenzyl)isothiourea (A22) disrupts the actin cytoskeleton of bacteria, causing defects of morphology and chromosome segregation. Previous studies have suggested that the actin homologue MreB itself is the target of A22, but there has been no direct observation of A22 binding to MreB and no mechanistic explanation of its mode of action. We show that A22 binds MreB with at least micromolar affinity in its nucleotide-binding pocket in a manner that is sterically incompatible with simultaneous ATP binding. A22 negatively affects both the time course and extent of MreB polymerization in vitro in the presence of ATP. A22 prevents assembly of MreB into long, rigid polymers, as determined by both fluorescence microscopy and sedimentation assays. A22 increases the critical concentration of ATP-bound MreB assembly from 500 nM to approximately 2000 nM. We therefore conclude that A22 is a competitive inhibitor of ATP binding to MreB. A22-bound MreB is capable of polymerization, but with assembly properties that more closely resemble those of the ADP-bound state. Because the cellular concentration of MreB is in the low micromolar range, this mechanism explains the ability of A22 to largely disassemble the actin cytoskeleton in bacterial cells. It also represents a novel mode of action for a cytoskeletal drug and the first biochemical characterization of the interaction between a small molecule inhibitor of the bacterial cytoskeleton and its target.
S-(3,4-二氯苄基)异硫脲(A22)破坏细菌的肌动蛋白细胞骨架,导致形态和染色体分离缺陷。先前的研究表明,肌动蛋白同源物MreB本身是A22的作用靶点,但尚未直接观察到A22与MreB的结合,也没有对其作用机制进行解释。我们发现,A22以至少微摩尔级的亲和力在其核苷酸结合口袋中与MreB结合,这种方式在空间上与ATP同时结合不相容。在ATP存在的情况下,A22对MreB体外聚合的时间进程和程度均产生负面影响。通过荧光显微镜和沉降分析确定,A22可阻止MreB组装成长而刚性的聚合物。A22将ATP结合的MreB组装的临界浓度从500 nM提高到约2000 nM。因此,我们得出结论,A22是ATP与MreB结合的竞争性抑制剂。结合A22的MreB能够聚合,但其组装特性更类似于结合ADP的状态。由于细胞中MreB的浓度处于低微摩尔范围内,这一机制解释了A22在很大程度上拆解细菌细胞中肌动蛋白细胞骨架的能力。它还代表了一种细胞骨架药物的新作用模式,以及细菌细胞骨架小分子抑制剂与其靶点之间相互作用的首次生化特征描述。