Caplan Michael R, Shah Miti M
Harrington Department of Bioengineering, Center for Interventional Biomaterials, Arizona State University, P.O. Box 879709, Tempe, AZ 85287-9709, USA.
Cell Biochem Biophys. 2009;54(1-3):1-10. doi: 10.1007/s12013-009-9048-5.
Bioactive materials present important micro-environmental cues that induce specific intracellular signaling responses which ultimately determine cell behavior. For example, vascular endothelial cells on a normal vessel wall resist inflammation and thrombosis, but the same cells seeded on an artificial vascular graft or stent do not. What makes these cells behave so differently when they are adhered to different materials? Intracellular signaling from integrins and other cell-surface receptors is an important part of the answer, but these signaling responses constitute a highly-branched, interconnected network of molecules. In order to perform rational design of biomaterials, one must understand how altering the properties of the material (micro-environment) causes changes in cell behavior, and this in turn requires understanding the complex signaling response. Systems biology and mathematical modeling aid analysis of the connectivity of this network. This review summarizes applicable systems biology and mathematical modeling techniques including ordinary differential equations-based models, principal component analysis, and Bayesian networks. Next covered is biomaterials research which studies the intracellular signaling responses generated by variation of biomaterial properties. Finally, the review details ways in which modeling has been or could be applied to better understand the link between biomaterial properties and intracellular signaling.
生物活性材料呈现出重要的微环境线索,这些线索会引发特定的细胞内信号反应,最终决定细胞行为。例如,正常血管壁上的血管内皮细胞能够抵抗炎症和血栓形成,但接种在人工血管移植物或支架上的同样细胞却不能。当这些细胞附着于不同材料时,是什么让它们表现得如此不同呢?整合素和其他细胞表面受体引发的细胞内信号传导是答案的重要组成部分,但这些信号反应构成了一个高度分支、相互连接的分子网络。为了对生物材料进行合理设计,必须了解改变材料特性(微环境)如何导致细胞行为发生变化,而这反过来又需要了解复杂的信号反应。系统生物学和数学建模有助于分析该网络的连通性。本综述总结了适用的系统生物学和数学建模技术,包括基于常微分方程的模型、主成分分析和贝叶斯网络。接下来涵盖的是生物材料研究,该研究探讨了生物材料特性变化所引发的细胞内信号反应。最后,本综述详细介绍了建模已被应用或可被应用的方式,以更好地理解生物材料特性与细胞内信号传导之间的联系。