Karshikov A, Duerring M, Huber R
Max-Planck-Institute of Biochemistry, Martinsried, Germany.
Protein Eng. 1991 Aug;4(6):681-90. doi: 10.1093/protein/4.6.681.
The role of electrostatic interactions between the charges carried by the titratable groups in the different aggregates of constitutive phycocyanin from Fremyella diplosiphon has been studied by using a simple theoretical approach based on the modified Tanford-Kirkwood model. The electrostatic potential has also been calculated by means of a numerical solution of the linearized Poisson-Boltzmann equations using the finite-differences technique. The pH dependence of the electrostatic contribution to free energy suggests an electrostatic stabilization of the alpha- and beta-subunits as well as of the (alpha beta)-monomer over a broad pH interval. The charge distributions in the individual alpha- and beta-subunits produce electrostatic complementarity and promote the assembly of the subunits to the (alpha beta)-monomer, as well as of the monomers to the larger trimeric and hexameric aggregates. Trimer-trimer electrostatic interactions exhibit strong pH dependence, predicting an association/dissociation equilibrium with a midpoint at pH 6. The electrostatic trimer-trimer interactions correspond to the steric fit, suggesting that electrostatic interactions may initially help to orient the trimers during aggregation. The distribution of the electrostatic potential of the monomers and of the higher aggregates suggests that it plays an important role also in phycocyanin-linker protein binding.
利用基于修正的坦福德-柯克伍德模型的简单理论方法,研究了来自双岐颤藻的组成型藻蓝蛋白不同聚集体中可滴定基团所带电荷之间的静电相互作用。还通过使用有限差分技术对线性化泊松-玻尔兹曼方程进行数值求解来计算静电势。静电对自由能贡献的pH依赖性表明,在较宽的pH区间内,α和β亚基以及(αβ)单体存在静电稳定作用。单个α和β亚基中的电荷分布产生静电互补性,并促进亚基组装成(αβ)单体,以及单体组装成更大的三聚体和六聚体聚集体。三聚体-三聚体静电相互作用表现出强烈的pH依赖性,预测在pH 6处存在一个中点的缔合/解离平衡。静电三聚体-三聚体相互作用对应于空间契合,表明静电相互作用可能在聚集过程中最初有助于三聚体的定向排列。单体和更高聚集体的静电势分布表明,它在藻蓝蛋白-连接蛋白结合中也起着重要作用。