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通过核磁共振C'-N交叉相关弛豫探测鸡肌动蛋白结合蛋白头部结构域的缓慢主链动力学

Slow backbone dynamics of chicken villin headpiece subdomain probed by NMR C'-N cross-correlated relaxation.

作者信息

Vugmeyster Liliya

机构信息

Department of Chemistry, University of Alaska Anchorage, 3211 Providence Drive, Anchorage, AK 99508, USA.

出版信息

Magn Reson Chem. 2009 Sep;47(9):746-51. doi: 10.1002/mrc.2456.

Abstract

We have investigated slow correlated motions of neighboring carbonyl and nitrogen nuclei in the backbone of chicken villin headpiece subdomain. Cross-correlated chemical shift modulation experiments were performed at three temperatures where the protein remains in its folded state. The results at 8 degrees C demonstrate the presence of microseconds to milliseconds timescale motions for a number of residues belonging both to helices and unstructured regions. As the temperature is raised, the motions become progressively less visible. The reduction of the contributions of slow motions into the cross-correlated relaxation rate with the rise in temperature is caused by the increase of the chemical exchange rate constants for the slow motion processes.

摘要

我们研究了鸡肌动蛋白头部亚结构域主链中相邻羰基和氮原子核的缓慢相关运动。在蛋白质保持折叠状态的三个温度下进行了交叉相关化学位移调制实验。8摄氏度时的结果表明,许多属于螺旋和非结构化区域的残基存在微秒到毫秒时间尺度的运动。随着温度升高,这些运动逐渐变得不明显。温度升高时,慢运动对交叉相关弛豫率贡献的降低是由慢运动过程的化学交换速率常数增加所致。

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