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未复制 DNA 对青蛙卵提取物细胞周期进程影响的定量模型。

A quantitative model of the effect of unreplicated DNA on cell cycle progression in frog egg extracts.

机构信息

Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, 24061, USA.

出版信息

J Theor Biol. 2009 Sep 7;260(1):110-20. doi: 10.1016/j.jtbi.2009.05.018. Epub 2009 May 31.

Abstract

A critical goal in cell biology is to develop a systems-level perspective of eukaryotic cell cycle controls. Among these controls, a complex signaling network (called 'checkpoints') arrests progression through the cell cycle when there is a threat to genomic integrity such as unreplicated or damaged DNA. Understanding the regulatory principles of cell cycle checkpoints is important because loss of checkpoint regulation may be a requisite step on the roadway to cancer. Mathematical modeling has proved to be a useful guide to cell cycle regulation by revealing the importance of bistability, hysteresis and time lags in governing cell cycle transitions and checkpoint mechanisms. In this report, we propose a mathematical model of the frog egg cell cycle including effects of unreplicated DNA on progression into mitosis. By a stepwise approach utilizing parameter estimation tools, we build a model that is grounded in fundamental behaviors of the cell cycle engine (hysteresis and time lags), includes new elements in the signaling network (Myt1 and Chk1 kinases), and fits a large and diverse body of data from the experimental literature. The model provides a validated framework upon which to build additional aspects of the cell cycle checkpoint signaling network, including those control signals in the mammalian cell cycle that are commonly mutated in cancer.

摘要

细胞生物学的一个关键目标是发展真核细胞周期调控的系统水平观点。在这些调控中,当基因组完整性受到威胁时,如未复制或受损的 DNA,一个复杂的信号网络(称为“检查点”)会阻止细胞周期的进展。理解细胞周期检查点的调控原理很重要,因为检查点调控的丧失可能是癌症发生的必要步骤。数学建模通过揭示双稳性、滞后和时滞在调控细胞周期转变和检查点机制中的重要性,已被证明是指导细胞周期调控的有用方法。在本报告中,我们提出了一个包括未复制 DNA 对有丝分裂进程影响的青蛙卵细胞周期的数学模型。通过利用参数估计工具的逐步方法,我们构建了一个模型,该模型基于细胞周期引擎的基本行为(滞后和时滞),包括信号网络中的新元素(Myt1 和 Chk1 激酶),并拟合了来自实验文献的大量多样的数据。该模型提供了一个经过验证的框架,可以在此基础上构建细胞周期检查点信号网络的其他方面,包括在癌症中通常发生突变的哺乳动物细胞周期中的那些控制信号。

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