• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用功能丧失和功能获得突变体对植物物种进行表型组分析。

Phenome analysis in plant species using loss-of-function and gain-of-function mutants.

作者信息

Kuromori Takashi, Takahashi Shinya, Kondou Youichi, Shinozaki Kazuo, Matsui Minami

机构信息

Gene Discovery Research Group, RIKEN Plant Science Center, Yokohama, Kanagawa, Japan.

出版信息

Plant Cell Physiol. 2009 Jul;50(7):1215-31. doi: 10.1093/pcp/pcp078. Epub 2009 Jun 5.

DOI:10.1093/pcp/pcp078
PMID:19502383
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2709550/
Abstract

Analysis of genetic mutations is one of the most effective ways to investigate gene function. We now have methods that allow for mass production of mutant lines and cells in a variety of model species. Recently, large numbers of mutant lines have been generated by both 'loss-of-function' and 'gain-of-function' techniques. In parallel, phenotypic information covering various mutant resources has been acquired and released in web-based databases. As a result, significant progress in comprehensive phenotype analysis is being made through the use of these tools. Arabidopsis and rice are two major model plant species in which genome sequencing projects have been completed. Arabidopsis is the most widely used experimental plant, with a large number of mutant resources and several examples of systematic phenotype analysis. Rice is a major crop species and is used as a model plant, with an increasing number of mutant resources. Other plant species are also being employed in functional genetics research. In this review, the present status of mutant resources for large-scale studies of gene function in plant research and the current perspective on using loss-of-function and gain-of-function mutants in phenome research will be discussed.

摘要

基因突变分析是研究基因功能最有效的方法之一。我们现在拥有能够在多种模式物种中大规模生产突变株系和细胞的方法。最近,通过“功能缺失”和“功能获得”技术已经产生了大量的突变株系。与此同时,涵盖各种突变资源的表型信息已被获取并发布在基于网络的数据库中。因此,通过使用这些工具,在综合表型分析方面正在取得重大进展。拟南芥和水稻是两个已完成基因组测序项目的主要模式植物物种。拟南芥是使用最广泛的实验植物,拥有大量的突变资源以及几个系统表型分析的实例。水稻是一种主要的作物物种,被用作模式植物,其突变资源也在不断增加。其他植物物种也正在被用于功能遗传学研究。在这篇综述中,将讨论植物研究中用于大规模基因功能研究的突变资源现状以及在表型组研究中使用功能缺失和功能获得突变体的当前观点。

相似文献

1
Phenome analysis in plant species using loss-of-function and gain-of-function mutants.利用功能丧失和功能获得突变体对植物物种进行表型组分析。
Plant Cell Physiol. 2009 Jul;50(7):1215-31. doi: 10.1093/pcp/pcp078. Epub 2009 Jun 5.
2
Application of full-length cDNA resources to gain-of-function technology for characterization of plant gene function.利用全长cDNA资源进行功能获得技术以鉴定植物基因功能
Methods Mol Biol. 2011;729:183-97. doi: 10.1007/978-1-61779-065-2_12.
3
A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis.一项利用4000个拟南芥基因编码区Ds插入突变体进行表型分析的试验。
Plant J. 2006 Aug;47(4):640-51. doi: 10.1111/j.1365-313X.2006.02808.x. Epub 2006 Jun 30.
4
High-throughput analysis of rice genes by means of the heterologous full-length cDNA overexpressor (FOX)-hunting system.利用异源全长cDNA过表达载体(FOX)猎取系统对水稻基因进行高通量分析。
Int J Dev Biol. 2013;57(6-8):517-23. doi: 10.1387/ijdb.130176mm.
5
Large-scale phenomics analysis of a T-DNA tagged mutant population.T-DNA标签突变体群体的大规模表型组学分析。
Gigascience. 2017 Aug 1;6(8):1-7. doi: 10.1093/gigascience/gix055.
6
RiceFOX: a database of Arabidopsis mutant lines overexpressing rice full-length cDNA that contains a wide range of trait information to facilitate analysis of gene function.RiceFOX:一个拟南芥过表达水稻全长 cDNA 突变体库,其中包含广泛的性状信息,有助于分析基因功能。
Plant Cell Physiol. 2011 Feb;52(2):265-73. doi: 10.1093/pcp/pcq190. Epub 2010 Dec 23.
7
Reverse genetic approaches for functional genomics of rice.用于水稻功能基因组学研究的反向遗传学方法
Plant Mol Biol. 2005 Sep;59(1):111-23. doi: 10.1007/s11103-004-4037-y.
8
How can we use genomics to improve cereals with rice as a reference genome?我们如何以水稻作为参考基因组,利用基因组学来改良谷物?
Plant Mol Biol. 2005 Sep;59(1):7-26. doi: 10.1007/s11103-004-4681-2.
9
Large-scale reverse genetics in Arabidopsis: case studies from the Chloroplast 2010 Project.拟南芥大规模反向遗传学:叶绿体 2010 项目的案例研究。
Plant Physiol. 2010 Feb;152(2):529-40. doi: 10.1104/pp.109.148494. Epub 2009 Nov 11.
10
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches.一个用于促进正向遗传学研究方法的拟南芥激活标签存档群体。
BMC Plant Biol. 2009 Jul 31;9:101. doi: 10.1186/1471-2229-9-101.

引用本文的文献

1
Comparative genomic analyses reveal different genetic basis of two types of fruit in Maloideae.比较基因组分析揭示了苹果亚科两种果实类型的不同遗传基础。
Nat Commun. 2025 Aug 12;16(1):7463. doi: 10.1038/s41467-025-62850-3.
2
Large-Scale Rice Mutant Establishment and High-Throughput Mutant Manipulation Help Advance Rice Functional Genomics.大规模水稻突变体构建及高通量突变体操作助力水稻功能基因组学发展
Plants (Basel). 2025 May 16;14(10):1492. doi: 10.3390/plants14101492.
3
A Versatile Plant Rhabdovirus-Based Vector for Gene Silencing, miRNA Expression and Depletion, and Antibody Production.一种基于植物弹状病毒的多功能载体,用于基因沉默、miRNA表达与缺失以及抗体生产。
Front Plant Sci. 2021 Jan 12;11:627880. doi: 10.3389/fpls.2020.627880. eCollection 2020.
4
Development of a novel and rapid phenotype-based screening method to assess rice seedling growth.开发一种基于表型的新型快速筛选方法以评估水稻幼苗生长。
Plant Methods. 2020 Oct 15;16:139. doi: 10.1186/s13007-020-00682-6. eCollection 2020.
5
Development of iFOX-hunting as a functional genomic tool and demonstration of its use to identify early senescence-related genes in the polyploid Brassica napus.开发 iFOX 作为一种功能基因组工具,并展示其在鉴定多倍体油菜中与早期衰老相关的基因中的应用。
Plant Biotechnol J. 2018 Feb;16(2):591-602. doi: 10.1111/pbi.12799. Epub 2017 Aug 22.
6
Morphological phenotyping and genetic analyses of a new chemical-mutagenized population of tobacco (Nicotiana tabacum L.).烟草(Nicotiana tabacum L.)新化学诱变群体的形态表型分析与遗传分析。
Planta. 2017 Jul;246(1):149-163. doi: 10.1007/s00425-017-2690-z. Epub 2017 Apr 11.
7
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation.通过整合Araport11注释来增强GABI-Kat拟南芥T-DNA插入突变体数据库。
Plant Cell Physiol. 2017 Jan 1;58(1):e7. doi: 10.1093/pcp/pcw205.
8
Non-destructive Phenotypic Analysis of Early Stage Tree Seedling Growth Using an Automated Stereovision Imaging Method.使用自动立体视觉成像方法对早期树苗生长进行无损表型分析。
Front Plant Sci. 2016 Oct 28;7:1644. doi: 10.3389/fpls.2016.01644. eCollection 2016.
9
Genetic control of flowering time in rice: integration of Mendelian genetics and genomics.水稻开花时间的遗传控制:孟德尔遗传学与基因组学的整合。
Theor Appl Genet. 2016 Dec;129(12):2241-2252. doi: 10.1007/s00122-016-2773-4. Epub 2016 Sep 30.
10
Quantitative proteomics identifies 38 proteins that are differentially expressed in cucumber in response to cucumber green mottle mosaic virus infection.定量蛋白质组学鉴定出38种在黄瓜中因感染黄瓜绿斑驳花叶病毒而差异表达的蛋白质。
Virol J. 2015 Dec 15;12:216. doi: 10.1186/s12985-015-0442-x.

本文引用的文献

1
Tolerance to various environmental stresses conferred by the salt-responsive rice gene ONAC063 in transgenic Arabidopsis.盐响应水稻基因ONAC063赋予转基因拟南芥对多种环境胁迫的耐受性。
Planta. 2009 Apr;229(5):1065-75. doi: 10.1007/s00425-009-0895-5. Epub 2009 Feb 19.
2
Studies on rice seed quality through analysis of a large-scale T-DNA insertion population.通过对大规模T-DNA插入群体的分析进行水稻种子质量研究。
Cell Res. 2009 Mar;19(3):380-91. doi: 10.1038/cr.2009.15.
3
Mutant resources in rice for functional genomics of the grasses.用于禾本科植物功能基因组学研究的水稻突变体资源。
Plant Physiol. 2009 Jan;149(1):165-70. doi: 10.1104/pp.108.128918.
4
TILLING in grass species.禾本科植物中的定向诱导基因组局部突变技术
Plant Physiol. 2009 Jan;149(1):158-64. doi: 10.1104/pp.108.128785.
5
Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila.从模式盐生植物盐芥中大规模收集和注释全长富集cDNA
BMC Plant Biol. 2008 Nov 12;8:115. doi: 10.1186/1471-2229-8-115.
6
Systematic approaches to using the FOX hunting system to identify useful rice genes.利用FOX猎取系统鉴定有用水稻基因的系统方法。
Plant J. 2009 Mar;57(5):883-94. doi: 10.1111/j.1365-313X.2008.03733.x. Epub 2008 Oct 29.
7
MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites.基于串联质谱光谱标签的植物次生代谢产物非靶向谱注释
Plant J. 2009 Feb;57(3):555-77. doi: 10.1111/j.1365-313X.2008.03705.x.
8
Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library.对来自一个全长富集cDNA文库的约40,000个大豆cDNA克隆进行测序和分析。
DNA Res. 2008 Dec;15(6):333-46. doi: 10.1093/dnares/dsn024. Epub 2008 Oct 16.
9
Establishment of a soybean (Glycine max Merr. L) transposon-based mutagenesis repository.基于转座子的大豆(Glycine max Merr. L)诱变文库的建立。
Planta. 2009 Jan;229(2):279-89. doi: 10.1007/s00425-008-0827-9. Epub 2008 Oct 15.
10
Applying genotyping (TILLING) and phenotyping analyses to elucidate gene function in a chemically induced sorghum mutant population.应用基因分型(定向诱导基因组局部突变)和表型分析来阐明化学诱导的高粱突变体群体中的基因功能。
BMC Plant Biol. 2008 Oct 14;8:103. doi: 10.1186/1471-2229-8-103.