Orlandini Enzo, Stella Attilio L, Vanderzande Carlo
Dipartimento di Fisica and CNR-INFM, Università di Padova, I-35131, Padova, Italy.
Phys Biol. 2009 Jul 1;6(2):025012. doi: 10.1088/1478-3975/6/2/025012.
Circular DNA in viruses and bacteria is often knotted. While mathematically problematic, the determination of the knot size is crucial for the study of the physical and biological behaviour of long macromolecules. Here, we review work on the size distribution of these knots under equilibrium conditions. We discuss knot localization in good and poor solvents, or in polymers that are adsorbed on a surface. We also discuss recent evidence that knot size is a crucial quantity in relaxation processes of knotted polymers.
病毒和细菌中的环状DNA常常是打结的。虽然在数学上存在问题,但确定结的大小对于研究长链大分子的物理和生物学行为至关重要。在这里,我们回顾了在平衡条件下这些结的大小分布的相关工作。我们讨论了结在良溶剂和不良溶剂中,或在吸附于表面的聚合物中的定位情况。我们还讨论了最近的证据,即结的大小在打结聚合物的松弛过程中是一个关键量。