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基于随机扩增多态性DNA分析的印度致倦库蚊(双翅目:蚊科)地理种群的遗传变异性

Genetic variability in geographical populations of Culex quinquefasciatus Say (Diptera: Culicidae) from India based on random amplified polymorphic DNA analysis.

作者信息

Sharma A K, Mendki M J, Tikar S N, Chandel K, Sukumaran D, Parashar B D, Veer Vijay, Agarwal O P, Prakash Shri

机构信息

Defence R & D Establishment, Gwalior, Madhya Pradesh, India.

出版信息

Acta Trop. 2009 Oct;112(1):71-6. doi: 10.1016/j.actatropica.2009.06.014. Epub 2009 Jul 3.

Abstract

Genetic variability and environmental factors may influence the refractiveness, propagation of pathogen and transmission of disease. Random amplified polymorphic DNA (RAPD) is one of the widely used molecular markers for population genetic diversity studies. In present study, RAPD is used to ascertain the genetic variability in Culex quinquefasciatus populations collected from various Indian geographical locations. Out of 50 RAPD primers screened, 14 primers exhibited clear, concrete and distinct banding pattern showing up to 100% polymorphism. Primer OPBD3 was tested with DNA of 14 geographical populations from India (including one laboratory population) showed 21 loci representing 14 populations with 100% polymorphism. The genetic diversity among the populations indicated the Shannon index (I) and gene diversity index (H(ST)), 0.48 and 0.31, respectively among the population, displaying rich genetic variation among the Cx. quinquefasciatus populations. Consensus tree showed two clusters indicating the genetic variation among the various geographical populations. The findings of this study may be useful to understand the population variation under different ecological conditions and development of effective vector management strategies.

摘要

遗传变异性和环境因素可能会影响病原体的折射性、繁殖及疾病传播。随机扩增多态性DNA(RAPD)是用于群体遗传多样性研究的广泛应用的分子标记之一。在本研究中,RAPD被用于确定从印度不同地理位置采集的致倦库蚊群体的遗传变异性。在筛选的50个RAPD引物中,14个引物呈现出清晰、具体且独特的条带模式,显示出高达100%的多态性。用来自印度14个地理群体(包括一个实验室群体)的DNA对引物OPBD3进行检测,显示21个位点代表14个群体,具有100%的多态性。群体间的遗传多样性表明香农指数(I)和基因多样性指数(H(ST))在群体中分别为0.48和0.31,表明致倦库蚊群体间存在丰富的遗传变异。共识树显示出两个聚类,表明不同地理群体间的遗传变异。本研究结果可能有助于理解不同生态条件下的群体变异以及制定有效的媒介管理策略。

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