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增强的蛋白质导向:抗原-抗体复合物中的协同静电力和范德华力

Enhanced protein steering: cooperative electrostatic and van der Waals forces in antigen-antibody complexes.

作者信息

Persson Björn A, Jönsson Bo, Lund Mikael

机构信息

Department of Theoretical Chemistry, Lund University, P.O. Box 124, SE-22100 Lund, Sweden.

出版信息

J Phys Chem B. 2009 Jul 30;113(30):10459-64. doi: 10.1021/jp904541g.

Abstract

We study the association of the cationic protein lysozyme with several almost neutral protein fragments but with highly uneven charge distributions. Using mesoscopic protein models, we show how electrostatic interactions can align or steer protein complexes into specific constellations dictated by the specific charge distributions of the interacting biomolecules. Including van der Waals forces significantly amplifies the electrostatically induced orientational steering at physiological solution conditions, demonstrating that different intermolecular interactions can work in a cooperative way in order to optimize specific biochemical mechanisms. Individually, the electrostatic and van der Waals interactions lead only to a relatively weak intermolecular alignment, but when combined, the effect increases significantly.

摘要

我们研究了阳离子蛋白溶菌酶与几个几乎呈中性但电荷分布极不均匀的蛋白质片段之间的关联。通过介观蛋白质模型,我们展示了静电相互作用如何能够将蛋白质复合物排列或引导成由相互作用生物分子的特定电荷分布所决定的特定构型。在生理溶液条件下,纳入范德华力会显著增强静电诱导的定向引导作用,这表明不同的分子间相互作用可以协同发挥作用,以优化特定的生化机制。单独来看,静电相互作用和范德华力仅导致相对较弱的分子间排列,但结合在一起时,效果会显著增强。

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