Sobiecka-Szkatula Anna, Polit Agnieszka, Scire Andrea, Gieldon Artur, Tanfani Fabio, Szkarlat Zaneta, Ciarkowski Jerzy, Zurawa-Janicka Dorota, Skorko-Glonek Joanna, Lipinska Barbara
Department of Biochemistry, University of Gdansk, Kladki 24, 80-822 Gdansk, Poland.
Biochim Biophys Acta. 2009 Nov;1794(11):1573-82. doi: 10.1016/j.bbapap.2009.07.002. Epub 2009 Jul 14.
The present investigation was undertaken to characterize mechanism of thermal activation of serine protease HtrA (DegP) from Escherichia coli. We monitored the temperature-induced structural changes within the regulatory loops L1, L2 and LA using a set of single-Trp HtrA mutants. The accessibility of each Trp residue to aqueous medium at temperature range 25-45 degrees C was assessed by steady-state fluorescence quenching using acrylamide and these results in combination with mean fluorescence lifetimes (tau) and wavelength emission maxima (lambda(em)max) were correlated with the induction of the HtrA proteolytic activity. Generally the temperature shift caused better exposure of Trps to the quencher; although, each of the loops was affected differently. The LA loop seemed to be the most prone to temperature-induced conformational changes and a significant opening of its structure was observed even at the lowest temperatures tested (25-30 degrees C). To the contrary, the L1 loop, containing the active site serine, remained relatively unchanged up to 40 degrees C. The L2 loop was the most exposed element and showed the most pronounced changes at temperatures exceeding 35 degrees C. Summing up, the HtrA structure appears to open gradually, parallel to the gradual increase of its proteolytic activity.
本研究旨在表征大肠杆菌丝氨酸蛋白酶HtrA(DegP)的热激活机制。我们使用一组单色氨酸HtrA突变体监测了温度诱导的调节环L1、L2和LA内的结构变化。通过使用丙烯酰胺的稳态荧光猝灭评估了每个色氨酸残基在25-45摄氏度温度范围内对水性介质的可及性,并且将这些结果与平均荧光寿命(τ)和波长发射最大值(λem max)相结合,与HtrA蛋白水解活性的诱导相关联。一般来说,温度变化导致色氨酸更好地暴露于猝灭剂;尽管如此,每个环受到的影响不同。LA环似乎最容易受到温度诱导的构象变化影响,甚至在测试的最低温度(25-30摄氏度)下也观察到其结构有明显的开放。相反,包含活性位点丝氨酸的L1环在40摄氏度之前相对保持不变。L2环是最暴露的元件,并且在超过35摄氏度的温度下显示出最明显的变化。总之,HtrA结构似乎随着其蛋白水解活性的逐渐增加而逐渐开放。