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针对半导体表面的肽的选择和质谱分析。

Selection and mass spectrometry characterization of peptides targeting semiconductor surfaces.

机构信息

UMR, CNRS-Université Montpellier II, France.

出版信息

Biotechnol Bioeng. 2009 Dec 15;104(6):1121-31. doi: 10.1002/bit.22478.

Abstract

We report on elaboration of 12-mer peptides that reveal specific recognition for the following semiconductor (SC) surfaces: GaAs(100), InAs(100), GaN(0001), ZnSe(100), ZnTe(100), GaAs(111)A, GaSb(100), CdSe(100). A M13 bacteriophage library was used to screen 10(9) different 12-mer peptides against these substrates to finally isolate, in maximum six amplification cycles, peptides that bind to the target surfaces. The specific peptides for the InAs and ZnSe surfaces were obtained. Contrary, for the other SC surfaces several peptides with high affinities have been isolated. Aiming for a better specificity, when the phage display has been conducted through six cycles, the screening procedure got dominated by a phage present in the M13 bacteriophage library and the SVSVGMKPSPRP peptide has been selected for different SCs. The high amplification potential of this phage has been observed previously with different targets. Thus, precaution should be undertaken in defining adhesion peptides with the phage display technique and real affinity of the obtained biolinkers should be studied with other methods. We employed mass spectrometry (MALDI-TOF/TOF) to demonstrate the preferential attachment (or not) of the SVSVGMKPSPRP peptide to the different SC surfaces. This allows us to define a realistic selection of the expressed peptides presenting affinity for the studied eight SC surfaces. We demonstrate that with increasing the dielectric constants of the employed solvents, adhesion of the SVSVGMKPSPRP peptide onto GaN(0001) is hindered.

摘要

我们报告了 12 个氨基酸肽的精心设计,这些肽可以特异性识别以下半导体 (SC) 表面:GaAs(100)、InAs(100)、GaN(0001)、ZnSe(100)、ZnTe(100)、GaAs(111)A、GaSb(100)、CdSe(100)。我们使用 M13 噬菌体文库筛选了 10(9)个不同的 12 个氨基酸肽,以针对这些基底物筛选出最终可以结合目标表面的肽。我们获得了针对 InAs 和 ZnSe 表面的特异性肽。相反,对于其他 SC 表面,已经分离出了几个具有高亲和力的肽。为了提高特异性,当噬菌体展示进行了六个循环时,筛选过程被噬菌体文库中的一个噬菌体所主导,并且 SVSVGMKPSPRP 肽被选择用于不同的 SC。这种噬菌体的高扩增潜力之前已经在不同的靶标中观察到。因此,在使用噬菌体展示技术定义粘附肽时应谨慎,并且应该使用其他方法研究获得的生物配体的实际亲和力。我们使用质谱 (MALDI-TOF/TOF) 来证明 SVSVGMKPSPRP 肽优先附着 (或不附着) 于不同的 SC 表面。这使我们能够定义对所研究的八个 SC 表面具有亲和力的表达肽的实际选择。我们证明,随着所用溶剂的介电常数的增加,SVSVGMKPSPRP 肽在 GaN(0001)上的粘附受到阻碍。

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