Perumal Senthil K, Yue Hongjun, Hu Zhenxin, Spiering Michelle M, Benkovic Stephen J
414 Wartik Laboratory, Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, USA.
Biochim Biophys Acta. 2010 May;1804(5):1094-112. doi: 10.1016/j.bbapap.2009.07.022. Epub 2009 Aug 7.
Fast and accurate replication of DNA is accomplished by the interactions of multiple proteins in the dynamic DNA replisome. The DNA replisome effectively coordinates the leading and lagging strand synthesis of DNA. These complex, yet elegantly organized, molecular machines have been studied extensively by kinetic and structural methods to provide an in-depth understanding of the mechanism of DNA replication. Owing to averaging of observables, unique dynamic information of the biochemical pathways and reactions is concealed in conventional ensemble methods. However, recent advances in the rapidly expanding field of single-molecule analyses to study single biomolecules offer opportunities to probe and understand the dynamic processes involved in large biomolecular complexes such as replisomes. This review will focus on the recent developments in the biochemistry and biophysics of DNA replication employing single-molecule techniques and the insights provided by these methods towards a better understanding of the intricate mechanisms of DNA replication.
DNA的快速准确复制是通过动态DNA复制体中多种蛋白质的相互作用来实现的。DNA复制体有效地协调了DNA前导链和后随链的合成。这些复杂却又组织精巧的分子机器已通过动力学和结构方法进行了广泛研究,以深入了解DNA复制机制。由于对可观测值进行平均处理,传统的总体方法掩盖了生化途径和反应的独特动态信息。然而,在快速发展的单分子分析领域,研究单个生物分子的最新进展为探究和理解大型生物分子复合物(如复制体)所涉及的动态过程提供了机会。本综述将聚焦于采用单分子技术在DNA复制生物化学和生物物理学方面的最新进展,以及这些方法为更好地理解DNA复制复杂机制所提供的见解。