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调控核孔运输中的自由能屏障。

Managing free-energy barriers in nuclear pore transport.

作者信息

Nielsen Brian, Jeppesen Claus, Ipsen John H

机构信息

Department of Physics, MEMPHYS-Centre for Biomembrane Physics, Syddansk Universitet, DK-5230 Odense, Denmark.

出版信息

J Biol Phys. 2006 Nov;32(5):465-72. doi: 10.1007/s10867-006-9029-5. Epub 2006 Dec 19.

Abstract

The Nuclear Pore Complexes (NPC) facilitate highly selective gateways for transport of macromolecules across the Nuclear Envelope (NE). Based on the current accumulated knowledge of the architecture of NPC we have established a minimal physical model of the pore and the transport mechanism. The barrier properties of the NPC model are analyzed by the recently established Wang-Landau Monte Carlo computer simulation technique and the transport properties are extracted by employing Kramers' theory of reaction rates. We show that our physical model can account for a range of characteristics observed for nuclear pore transport.

摘要

核孔复合体(NPC)为大分子穿过核膜(NE)的运输提供了高度选择性的通道。基于目前对NPC结构积累的认识,我们建立了一个关于核孔及其运输机制的最小物理模型。通过最近建立的王-朗道蒙特卡罗计算机模拟技术分析了NPC模型的屏障特性,并运用克莱默斯反应速率理论提取了运输特性。我们表明,我们的物理模型能够解释在核孔运输中观察到的一系列特征。

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本文引用的文献

1
Characterization of the elastic properties of the nuclear envelope.核膜弹性特性的表征
J R Soc Interface. 2005 Mar 22;2(2):63-9. doi: 10.1098/rsif.2004.0022.
3
7
Imaging of single-molecule translocation through nuclear pore complexes.通过核孔复合体的单分子转位成像。
Proc Natl Acad Sci U S A. 2004 Aug 31;101(35):12887-92. doi: 10.1073/pnas.0403675101. Epub 2004 Aug 11.
8
The nuclear pore complex: a jack of all trades?核孔复合体:万能之物?
Trends Biochem Sci. 2004 Apr;29(4):175-82. doi: 10.1016/j.tibs.2004.02.006.
10
Robbing from the pore.从毛孔中窃取。
Nat Cell Biol. 2004 Mar;6(3):177-9. doi: 10.1038/ncb0304-177.

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