Roos Goedele, Foloppe Nicolas, Van Laer Koen, Wyns Lode, Nilsson Lennart, Geerlings Paul, Messens Joris
Department of Molecular and Cellular Interactions, Vlaams Interuniversitair Instituut voor Biotechnologie, Brussels, Belgium.
PLoS Comput Biol. 2009 Aug;5(8):e1000461. doi: 10.1371/journal.pcbi.1000461. Epub 2009 Aug 13.
The dissociation mechanism of the thioredoxin (Trx) mixed disulfide complexes is unknown and has been debated for more than twenty years. Specifically, opposing arguments for the activation of the nucleophilic cysteine as a thiolate during the dissociation of the complex have been put forward. As a key model, the complex between Trx and its endogenous substrate, arsenate reductase (ArsC), was used. In this structure, a Cys29(Trx)-Cys89(ArsC) intermediate disulfide is formed by the nucleophilic attack of Cys29(Trx) on the exposed Cys82(ArsC)-Cys89(ArsC) in oxidized ArsC. With theoretical reactivity analysis, molecular dynamics simulations, and biochemical complex formation experiments with Cys-mutants, Trx mixed disulfide dissociation was studied. We observed that the conformational changes around the intermediate disulfide bring Cys32(Trx) in contact with Cys29(Trx). Cys32(Trx) is activated for its nucleophilic attack by hydrogen bonds, and Cys32(Trx) is found to be more reactive than Cys82(ArsC). Additionally, Cys32(Trx) directs its nucleophilic attack on the more susceptible Cys29(Trx) and not on Cys89(ArsC). This multidisciplinary approach provides fresh insights into a universal thiol/disulfide exchange reaction mechanism that results in reduced substrate and oxidized Trx.
硫氧还蛋白(Trx)混合二硫键复合物的解离机制尚不清楚,二十多年来一直存在争议。具体而言,关于复合物解离过程中亲核半胱氨酸作为硫醇盐被激活的观点存在对立。作为一个关键模型,使用了Trx与其内源性底物砷酸还原酶(ArsC)之间的复合物。在这个结构中,Cys29(Trx)对氧化态ArsC中暴露的Cys82(ArsC)-Cys89(ArsC)进行亲核攻击,形成了Cys29(Trx)-Cys89(ArsC)中间二硫键。通过理论反应活性分析、分子动力学模拟以及与半胱氨酸突变体的生化复合物形成实验,对Trx混合二硫键的解离进行了研究。我们观察到,中间二硫键周围的构象变化使Cys32(Trx)与Cys29(Trx)接触。Cys32(Trx)通过氢键被激活以进行亲核攻击,并且发现Cys32(Trx)比Cys82(ArsC)更具反应活性。此外,Cys32(Trx)将其亲核攻击指向更易反应的Cys29(Trx),而不是Cys89(ArsC)。这种多学科方法为一种普遍的硫醇/二硫键交换反应机制提供了新的见解,该机制导致底物还原和Trx氧化。