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快速动态响应的发酵代谢大肠杆菌有氧和无氧葡萄糖脉冲。

Fast dynamic response of the fermentative metabolism of Escherichia coli to aerobic and anaerobic glucose pulses.

机构信息

Departamento de Procesos y Tecnología, Universidad Autónoma Metropolitana-Cuajimalpa Artificios, Col. Miguel Hidalgo, Del. Alvaro Obregón, Mexico DF, C P, Mexico.

出版信息

Biotechnol Bioeng. 2009 Dec 15;104(6):1153-61. doi: 10.1002/bit.22503.

Abstract

The response of Escherichia coli cells to transient exposure (step increase) in substrate concentration and anaerobiosis leading to mixed-acid fermentation metabolism was studied in a two-compartment bioreactor system consisting of a stirred tank reactor (STR) connected to a mini-plug-flow reactor (PFR: BioScope, 3.5 mL volume). Such a system can mimic the situation often encountered in large-scale, fed-batch bioreactors. The STR represented the zones of a large-scale bioreactor that are far from the point of substrate addition and that can be considered as glucose limited, whereas the PFR simulated the region close to the point of substrate addition, where glucose concentration is much higher than in the rest of the bioreactor. In addition, oxygen-poor and glucose-rich regions can occur in large-scale bioreactors. The response of E. coli to these large-scale conditions was simulated by continuously pumping E. coli cells from a well stirred, glucose limited, aerated chemostat (D = 0.1 h(-1)) into the mini-PFR. A glucose pulse was added at the entrance of the PFR. In the PFR, a total of 11 samples were taken in a time frame of 92 s. In one case aerobicity in the PFR was maintained in order to evaluate the effects of glucose overflow independently of oxygen limitation. Accumulation of acetate and formate was detected after E. coli cells had been exposed for only 2 s to the glucose-rich (aerobic) region in the PFR. In the other case, the glucose pulse was also combined with anaerobiosis in the PFR. Glucose overflow combined with anaerobiosis caused the accumulation of formate, acetate, lactate, ethanol, and succinate, which were also detected as soon as 2 s after of exposure of E. coli cells to the glucose and O(2) gradients. This approach (STR-mini-PFR) is useful for a better understanding of the fast dynamic phenomena occurring in large-scale bioreactors and for the design of modified strains with an improved behavior under large-scale conditions.

摘要

该研究使用由搅拌槽式反应器(STR)和微型推流式反应器(PFR:BioScope,3.5 mL 体积)组成的两室生物反应器系统,研究了大肠杆菌细胞对底物浓度的瞬态暴露(阶跃增加)和厌氧导致的混合酸发酵代谢的反应。这种系统可以模拟大型分批补料生物反应器中经常遇到的情况。STR 代表远离底物添加点的大型生物反应器区域,可以认为其处于葡萄糖限制状态,而 PFR 模拟了靠近底物添加点的区域,其中葡萄糖浓度远高于生物反应器的其余部分。此外,大型生物反应器中可能会出现贫氧和富含葡萄糖的区域。通过将大肠杆菌细胞从搅拌良好、葡萄糖限制、通气恒化器(D = 0.1 h(-1)) 连续泵入微型 PFR 中,模拟大肠杆菌对这些大规模条件的反应。在 PFR 的入口处添加葡萄糖脉冲。在 PFR 中,在 92 秒的时间框架内总共采集了 11 个样本。在一种情况下,维持 PFR 中的需氧条件,以独立于氧限制评估葡萄糖溢出的影响。在大肠杆菌细胞仅暴露于 PFR 中富含葡萄糖(需氧)区域 2 秒后,就检测到乙酸盐和甲酸盐的积累。在另一种情况下,葡萄糖脉冲也与 PFR 中的厌氧相结合。葡萄糖溢出与厌氧相结合导致甲酸、乙酸盐、乳酸盐、乙醇和琥珀酸盐的积累,在大肠杆菌细胞暴露于葡萄糖和 O(2)梯度后仅 2 秒即可检测到这些物质。这种方法(STR-微型 PFR)有助于更好地理解大型生物反应器中发生的快速动态现象,并设计在大规模条件下具有改进行为的改良菌株。

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