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Massively parallel sequencing: the next big thing in genetic medicine.大规模平行测序:基因医学的下一个重大突破。
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The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine.临床序列计划:为基因组医学研究开展大规模基因组测序试点。
Genome Res. 2009 Sep;19(9):1665-74. doi: 10.1101/gr.092841.109. Epub 2009 Jul 14.
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Gene expression profiling in monocytes and SNP association suggest the importance of the STAT1 gene for osteoporosis in both Chinese and Caucasians.单核细胞基因表达谱和 SNP 关联表明 STAT1 基因对中国和高加索人群骨质疏松症的重要性。
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VarScan: variant detection in massively parallel sequencing of individual and pooled samples.VarScan:个体样本与混合样本大规模平行测序中的变异检测
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Bone mineral density variation in men is influenced by sex-specific and non sex-specific quantitative trait loci.男性骨矿物质密度的变化受性别特异性和非性别特异性数量性状位点的影响。
Bone. 2009 Sep;45(3):443-8. doi: 10.1016/j.bone.2009.05.002. Epub 2009 May 8.
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A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.一项针对亚洲人群的大规模全基因组关联研究揭示了影响八个数量性状的遗传因素。
Nat Genet. 2009 May;41(5):527-34. doi: 10.1038/ng.357. Epub 2009 Apr 26.
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Wnt signaling as a therapeutic target for bone diseases.Wnt信号通路作为骨疾病的治疗靶点
Expert Opin Ther Targets. 2009 Apr;13(4):485-96. doi: 10.1517/14728220902841961.
8
Generation of Cre recombinase-expressing transgenic mice using bacterial artificial chromosomes.利用细菌人工染色体产生表达Cre重组酶的转基因小鼠。
Methods Mol Biol. 2009;530:325-42. doi: 10.1007/978-1-59745-471-1_17.
9
Quantitative trait loci for biomechanical performance and femoral geometry in an intercross of recombinant congenic mice: restriction of the Bmd7 candidate interval.重组近交系小鼠杂交后代中生物力学性能和股骨几何形状的数量性状基因座:Bmd7候选区间的限定
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Recombinant DNA technologies for construction of precisely designed transgene constructs.用于构建精确设计的转基因构建体的重组DNA技术。
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基因组学如何帮助我们理解骨质疏松症的发病机制。

How genomics has informed our understanding of the pathogenesis of osteoporosis.

机构信息

Department of Oral Biology, University of Missouri - Kansas City School of Dentistry, 650 East 25th Street, Kansas City, MO 64108, USA.

出版信息

Genome Med. 2009 Sep 7;1(9):84. doi: 10.1186/gm84.

DOI:10.1186/gm84
PMID:19735586
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2768991/
Abstract

Osteoporosis is a skeletal disorder characterized by compromised bone strength that predisposes a person to an increased risk of fracture. Osteoporosis is a complex trait that involves multiple genes, environmental factors, and gene-gene and gene-environment interactions. Twin and family studies have indicated that between 25% and 85% of the variation in bone mass and other skeletal phenotypes is heritable, but our knowledge of the underlying genes is limited. Bone mineral density is the most common assessment for diagnosing osteoporosis and is the most often used quantitative value in the design of genetic studies. In recent years, our understanding of the pathophysiology of osteoporosis has been greatly facilitated by advances brought about by the Human Genome Project. Genetic approaches ranging from family studies of monogenic traits to association studies with candidate genes, to whole-genome scans in both humans and animals have identified a small number of genes that contribute to the heritability of bone mass. Studies with transgenic and knockout mouse models have revealed major new insights into the biology of many of these identified genes, but much more needs to be learned. Ultimately, we hope that by revealing the underlying genetics and biology driving the pathophysiology of osteoporosis, new and effective treatment can be developed to combat and possibly cure this devastating disease. Here we review the rapidly evolving field of the genomics of osteoporosis with a focus on important gene discoveries, new biological/physiological paradigms that are emerging, and many of the unanswered questions and hurdles yet to be overcome in the field.

摘要

骨质疏松症是一种骨骼疾病,其特征是骨强度受损,使患者骨折风险增加。骨质疏松症是一种复杂的特征,涉及多个基因、环境因素以及基因-基因和基因-环境相互作用。双胞胎和家族研究表明,骨骼表型的骨量和其他特征的 25%至 85%的变化是可遗传的,但我们对潜在基因的了解有限。骨矿物质密度是诊断骨质疏松症最常用的评估方法,也是遗传研究设计中最常用的定量值。近年来,人类基因组计划带来的进展极大地促进了我们对骨质疏松症病理生理学的理解。遗传方法从单基因特征的家族研究到候选基因的关联研究,再到人类和动物的全基因组扫描,已经确定了少数几个基因对骨量的遗传性有贡献。使用转基因和基因敲除小鼠模型的研究揭示了许多已识别基因的生物学的新的重要见解,但仍有许多需要了解。最终,我们希望通过揭示导致骨质疏松症病理生理学的潜在遗传学和生物学,开发出新的有效治疗方法来对抗甚至可能治愈这种破坏性疾病。在这里,我们将重点介绍重要的基因发现、新兴的新生物学/生理学范例,以及该领域尚未解决的许多问题和障碍,来回顾骨质疏松症基因组学这一快速发展的领域。