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估算 DNA 条形码的样本大小。

Estimating sample sizes for DNA barcoding.

机构信息

College of Life Sciences, Capital Normal University, Beijing 100048, PR China.

出版信息

Mol Phylogenet Evol. 2010 Mar;54(3):1035-9. doi: 10.1016/j.ympev.2009.09.014. Epub 2009 Sep 15.

Abstract

Sample size has long been one of the basic issues since the start of the DNA barcoding initiative and the global biodiversity investigation. As a contribution to resolving this problem, we propose a simple resampling approach to estimate several key sampling sizes for a DNA barcoding project. We illustrate our approach using both structured populations simulated under coalescent and real species of skipper butterflies. We found that sample sizes widely used in DNA barcoding are insufficient to assess the genetic diversity of a species, population structure impacts the estimation of the sample sizes, and hence will bias the species identification potentially.

摘要

样本量一直是 DNA 条形码倡议和全球生物多样性调查开始以来的基本问题之一。作为解决这一问题的贡献,我们提出了一种简单的重采样方法来估计 DNA 条形码项目的几个关键样本量。我们使用基于合并的结构化种群和真正的蛱蝶物种来演示我们的方法。我们发现,DNA 条形码中广泛使用的样本量不足以评估物种的遗传多样性,种群结构会影响样本量的估计,从而可能导致物种鉴定的偏差。

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