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建模和模拟工具在生物催化过程评估中的应用:未来展望。

Application of modeling and simulation tools for the evaluation of biocatalytic processes: a future perspective.

机构信息

Department of Chemical and Biochemical Engineering, Computer Aided Process-Product Engineering Center (CAPEC), Technical University of Denmark, Lyngby, Denmark.

出版信息

Biotechnol Prog. 2009 Nov-Dec;25(6):1529-38. doi: 10.1002/btpr.276.

Abstract

Modeling and simulation techniques have for some time been an important feature of biocatalysis research, often applied as a complement to experimental studies. In this short review, we report on the state-of-the-art process and kinetic modeling for biocatalysis with the aim of identifying future research needs. We have particularly focused on four aspects of modeling: (i) the model purpose, (ii) the process model boundary, (iii) the model structure, and (iv) the model identification procedure. First, one finds that most of the existing models describe biocatalyst behavior in terms of enzyme selectivity, mechanism, and reaction kinetics. More recently, work has focused on extending these models to obtain process flowsheet descriptions. Second, biocatalysis models remain at a relatively low level of complexity compared with the trends observed in other engineering disciplines. Hence, there is certainly room for additional development, i.e., detailed mixing and hydrodynamics, more process units (e.g., biorefinery). Third, biocatalysis models have been only partially subjected to formal statistical analysis. In particular, uncertainty analysis is needed to ascertain reliability of the predictions of the process model, which is necessary to make sound engineering decisions (e.g., the optimal process flowsheet, control strategy, etc). In summary, for modeling studies to be more mature and successful, one needs to introduce Good Modeling Practice and that asks for (i) a standardized and systematic guideline for model development, (ii) formal identifiability analysis, and (iii) uncertainty analysis. This will advance the utility of models in biocatalysis for more rigorous application within process design, optimization, and control strategy evaluation.

摘要

建模和模拟技术在一段时间以来一直是生物催化研究的一个重要特征,通常作为实验研究的补充应用。在这篇简短的综述中,我们报告了生物催化的最新过程和动力学建模,旨在确定未来的研究需求。我们特别关注建模的四个方面:(i)模型目的,(ii)过程模型边界,(iii)模型结构,和(iv)模型识别过程。首先,人们发现大多数现有的模型都是根据酶的选择性、机制和反应动力学来描述生物催化剂的行为。最近,工作重点已扩展到这些模型,以获得过程流程图描述。其次,与其他工程学科中观察到的趋势相比,生物催化模型仍然处于相对较低的复杂性水平。因此,肯定有进一步发展的空间,例如,详细的混合和流体动力学,更多的过程单元(例如,生物精炼厂)。第三,生物催化模型仅部分经过正式的统计分析。特别是,需要进行不确定性分析以确定过程模型预测的可靠性,这对于做出合理的工程决策(例如,最佳工艺流程图、控制策略等)是必要的。总之,为了使建模研究更加成熟和成功,需要引入良好的建模实践,这需要(i)用于模型开发的标准化和系统指南,(ii)正式的可识别性分析,和(iii)不确定性分析。这将推进模型在生物催化中的应用,以便更严格地应用于过程设计、优化和控制策略评估。

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