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微卫星标记的开发和门德尔遗传分析在马氏树袋鼠(Dendrolagus matschiei)中。

Microsatellite marker development and Mendelian analysis in the Matschie's tree kangaroo (Dendrolagus matschiei).

机构信息

Department of Natural Resources Science, Coastal Institute, University of Rhode Island, Kingston, RI 02881, USA.

出版信息

J Hered. 2010 Jan-Feb;101(1):113-8. doi: 10.1093/jhered/esp080.

DOI:10.1093/jhered/esp080
PMID:19783838
Abstract

Matschie's tree kangaroo (Dendrolagus matschiei) is an endangered arboreal macropodid endemic to the Huon Peninsula, Papua New Guinea (PNG). We developed 5 microsatellite markers for D. matschiei, which are the first markers developed for Dendrolagus. We screened 17 additional markers that were developed for other marsupial taxa and identified 3 that were polymorphic in D. matschiei. We estimated allelic and genetic diversity with the set of 8 markers by analyzing 22 D. matschiei from Wasaunon on the Huon Peninsula, PNG. The number of alleles ranged from 2 to 9 and expected heterozygosity ranged from 0.440 to 0.794. We tested for null alleles and Mendelian inheritance by analyzing 19 pairs of D. matschiei parents and offspring from Association of Zoos and Aquariums institutions. Null alleles were not detected and Mendelian inheritance was followed for all 8 markers. We also evaluated the reliability of using the markers to amplify DNA extracted from D. matschiei fecal samples and the ability of the markers to amplify DNA samples from Goodfellow's tree kangaroo (Dendrolagus goodfellowi ssp.), Doria's tree kangaroo (Dendrolagus dorianus ssp.), and Grizzled tree kangaroo (Dendrolagus inustus ssp.). Microsatellite markers can be used to inform management decisions to conserve D. matschiei in captivity and the wild.

摘要

马奇氏树袋鼠(Dendrolagus matschiei)是一种濒危的树栖有袋动物,仅分布于巴布亚新几内亚(PNG)的胡昂半岛。我们开发了 5 个用于 Dendrolagus 的微卫星标记,这是第一批为 Dendrolagus 开发的标记。我们筛选了另外 17 个为其他有袋类动物开发的标记,在 D. matschiei 中鉴定出 3 个多态性标记。我们通过分析来自 PNG 胡昂半岛瓦萨乌农的 22 只 D. matschiei,使用这 8 个标记来估计等位基因和遗传多样性。等位基因数范围从 2 到 9,预期杂合度范围从 0.440 到 0.794。我们通过分析来自动物园和水族馆协会的 19 对 D. matschiei 父母和后代,来检测无效等位基因和孟德尔遗传。未检测到无效等位基因,所有 8 个标记均遵循孟德尔遗传。我们还评估了使用这些标记来扩增从 D. matschiei 粪便样本中提取的 DNA 的可靠性,以及这些标记从好氏树袋鼠(Dendrolagus goodfellowi ssp.)、多里亚氏树袋鼠(Dendrolagus dorianus ssp.)和灰斑树袋鼠(Dendrolagus inustus ssp.)中扩增 DNA 样本的能力。微卫星标记可用于为保护圈养和野外的 D. matschiei 做出管理决策提供信息。

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