Immunophysiology and Intracellular Parasitism Unit, Department of Parasitology and Mycology, 75015 Paris, France.
BMC Med Genomics. 2009 Oct 2;2:63. doi: 10.1186/1755-8794-2-63.
Autoimmune diabetes (T1D) onset is preceded by a long inflammatory process directed against the insulin-secreting beta cells of the pancreas. Deciphering the early autoimmune mechanisms represents a challenge due to the absence of clinical signs at early disease stages. The aim of this study was to identify genes implicated in the early steps of the autoimmune process, prior to inflammation, in T1D. We have previously established that insulin autoantibodies (E-IAA) predict early diabetes onset delineating an early phenotypic check point (window 1) in disease pathogenesis. We used this sub-phenotype and applied differential gene expression analysis in the pancreatic lymph nodes (PLN) of 5 weeks old Non Obese Diabetic (NOD) mice differing solely upon the presence or absence of E-IAA. Analysis of gene expression profiles has the potential to provide a global understanding of the disease and to generate novel hypothesis concerning the initiation of the autoimmune process.
Animals have been screened weekly for the presence of E-IAA between 3 and 5 weeks of age. E-IAA positive or negative NOD mice at least twice were selected and RNAs isolated from the PLN were used for microarray analysis. Comparison of transcriptional profiles between positive and negative animals and functional annotations of the resulting differentially expressed genes, using software together with manual literature data mining, have been performed.
The expression of 165 genes was modulated between E-IAA positive and negative PLN. In particular, genes coding for insulin and for proteins known to be implicated in tissue remodelling and Th1 immunity have been found to be highly differentially expressed. Forty one genes showed over 5 fold differences between the two sets of samples and 30 code for extracellular proteins. This class of proteins represents potential diagnostic markers and drug targets for T1D.
Our data strongly suggest that the immune related mechanisms taking place at this early age in the PLN, correlate with homeostatic changes influencing tissue integrity of the adjacent pancreatic tissue. Functional analysis of the identified genes suggested that similar mechanisms might be operating during pre-inflammatory processes deployed in tissues i) hosting parasitic microorganisms and ii) experiencing unrestricted invasion by tumour cells.
自身免疫性糖尿病(T1D)的发病前存在针对胰腺胰岛β细胞的长期炎症过程。由于在疾病早期阶段缺乏临床症状,因此破译早期自身免疫机制是一个挑战。本研究旨在鉴定 T1D 发病前炎症前阶段早期自身免疫过程中涉及的基因。我们之前已经确定,胰岛素自身抗体(E-IAA)可预测早期糖尿病发病,从而在疾病发病机制中确定了早期表型检查点(窗口 1)。我们使用这种亚表型,并在仅存在或不存在 E-IAA 的 5 周龄非肥胖糖尿病(NOD)小鼠的胰腺淋巴结(PLN)中应用差异基因表达分析。基因表达谱分析有可能提供对疾病的全面了解,并产生关于自身免疫过程启动的新假设。
在 3 至 5 周龄之间每周对动物进行 E-IAA 的存在情况进行筛查。选择至少两次 E-IAA 阳性或阴性的 NOD 小鼠,并从 PLN 中分离 RNA 进行微阵列分析。使用软件和手动文献数据挖掘对阳性和阴性动物之间的转录谱进行比较,并对差异表达基因进行功能注释。
E-IAA 阳性和阴性 PLN 之间的 165 个基因表达发生了调节。特别是编码胰岛素和已知参与组织重塑和 Th1 免疫的蛋白质的基因表达差异显著。有 41 个基因在两组样本之间差异超过 5 倍,30 个基因编码细胞外蛋白。这类蛋白质代表 T1D 的潜在诊断标志物和药物靶点。
我们的数据强烈表明,在 PLN 中这个早期年龄发生的免疫相关机制与影响相邻胰腺组织组织完整性的稳态变化相关。鉴定出的基因的功能分析表明,类似的机制可能在部署于组织中的炎症前过程中起作用,这些组织包括:i)寄生微生物宿主,ii)肿瘤细胞不受限制地入侵。