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动力蛋白轻链蛋白的结构-功能-折叠关系及天然能量景观:核磁共振见解

Structure-function-folding relationships and native energy landscape of dynein light chain protein: nuclear magnetic resonance insights.

作者信息

Mohan P M Krishna, Hosur Ramakrishna V

机构信息

Department of Chemical Sciences, Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400 005, India.

出版信息

J Biosci. 2009 Sep;34(3):465-79. doi: 10.1007/s12038-009-0052-0.

DOI:10.1007/s12038-009-0052-0
PMID:19805907
Abstract

The detailed characterization of the structure, dynamics and folding process of a protein is crucial for understanding the biological functions it performs. Modern biophysical and nuclear magnetic resonance (NMR) techniques have provided a way to obtain accurate structural and thermodynamic information on various species populated on the energy landscape of a given protein. In this context, we review here the structure-function-folding relationship of an important protein, namely, dynein light chain protein (DLC8). DLC8, the smallest subunit of the dynein motor complex, acts as a cargo adaptor. The protein exists as a dimer under physiological conditions and dissociates into a pure monomer below pH 4. Cargo binding occurs at the dimer interface. Dimer stability and relay of perturbations through the dimer interface are anticipated to be playing crucial roles in the variety of functions the protein performs. NMR investigations have provided great insights into these aspects of DLC8 in recent years.

摘要

蛋白质结构、动力学和折叠过程的详细表征对于理解其执行的生物学功能至关重要。现代生物物理和核磁共振(NMR)技术提供了一种方法,可获取给定蛋白质能量景观上各种物种的准确结构和热力学信息。在此背景下,我们在此回顾一种重要蛋白质,即动力蛋白轻链蛋白(DLC8)的结构 - 功能 - 折叠关系。DLC8是动力蛋白运动复合体的最小亚基,作为货物适配器发挥作用。该蛋白在生理条件下以二聚体形式存在,在pH值低于4时解离为纯单体。货物结合发生在二聚体界面。预计二聚体稳定性以及通过二聚体界面传递的扰动在该蛋白执行的各种功能中起着关键作用。近年来,NMR研究为DLC8的这些方面提供了深入见解。

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本文引用的文献

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Hierarchy in guanidine unfolding of DLC8 dimer: regulatory functional implications.动力蛋白轻链8二聚体胍变性中的层级结构:调节功能意义
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Residue-wise conformational stability of DLC8 dimer from native-state hydrogen exchange.
FhCaBP4:一种具有 EF 手和动力蛋白轻链结构域的肝片形吸虫钙结合蛋白。
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Aplysqualenol A binds to the light chain of dynein type 1 (DYNLL1).阿朴脂醇 A 与动力蛋白 1 的轻链(DYNLL1)结合。
Angew Chem Int Ed Engl. 2011 Aug 22;50(35):8134-8. doi: 10.1002/anie.201102546. Epub 2011 Jul 8.
基于天然态氢交换的动力蛋白轻链8(DLC8)二聚体的残基构象稳定性
Proteins. 2009 Apr;75(1):40-52. doi: 10.1002/prot.22219.
4
pH dependent unfolding characteristics of DLC8 dimer: Residue level details from NMR.动力蛋白轻链8(DLC8)二聚体的pH依赖性解折叠特性:来自核磁共振的残基水平细节
Biochim Biophys Acta. 2008 Nov;1784(11):1795-803. doi: 10.1016/j.bbapap.2008.07.007. Epub 2008 Jul 21.
5
NMR characterization of structural and dynamics perturbations due to a single point mutation in Drosophila DLC8 dimer: functional implications.果蝇DLC8二聚体单点突变引起的结构和动力学扰动的核磁共振表征:功能意义
Biochemistry. 2008 Jun 10;47(23):6251-9. doi: 10.1021/bi800531g. Epub 2008 May 9.
6
NMR comparison of the native energy landscapes of DLC8 dimer and monomer.动力蛋白轻链8(DLC8)二聚体和单体天然能量景观的核磁共振比较。
Biophys Chem. 2008 Apr;134(1-2):10-9. doi: 10.1016/j.bpc.2007.12.010. Epub 2008 Jan 12.
7
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Proteins. 2008 Mar;70(4):1147-53. doi: 10.1002/prot.21751.
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Unfolding energetics and conformational stability of DLC8 monomer.动力蛋白轻链8单体的去折叠能量学与构象稳定性
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